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6MD2

Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and Arachidonic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue GW9 A 501
ChainResidue
APHE282
AACD502
AHOH617
ACYS285
AGLN286
AARG288
ASER289
ATYR327
ALEU330
AHIS449
ATYR473

site_idAC2
Number of Residues14
Detailsbinding site for residue ACD A 502
ChainResidue
AGLY284
ACYS285
APHE287
AARG288
AGLU291
AVAL339
AILE341
ASER342
AGLU343
AMET348
AMET364
AGW9501
AHOH617
AHOH679

site_idAC3
Number of Residues10
Detailsbinding site for residue GW9 B 501
ChainResidue
BPHE282
BCYS285
BSER289
BHIS323
BILE326
BTYR327
BLEU330
BPHE363
BHIS449
BACD502

site_idAC4
Number of Residues12
Detailsbinding site for residue ACD B 502
ChainResidue
BLYS265
BILE281
BGLY284
BCYS285
BPHE287
BARG288
BGLU291
BVAL339
BSER342
BGLU343
BGW9501
BHOH682

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9744270","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2PRG","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"36737649","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

242842

PDB entries from 2025-10-08

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