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6MD1

Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and Oleic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue OLA A 501
ChainResidue
ACYS285
APHE287
AARG288
AILE341
ASER342
AGLU343
AMET364
AHOH609
AHOH623

site_idAC2
Number of Residues9
Detailsbinding site for residue OLA B 502
ChainResidue
BILE281
BPHE287
BARG288
BGLU291
BILE341
BSER342
BGLU343
BMET364
BHOH671

site_idAC3
Number of Residues15
Detailsbinding site for Di-peptide GW9 B 501 and CYS B 285
ChainResidue
BILE281
BPHE282
BGLN283
BGLY284
BGLN286
BPHE287
BARG288
BSER289
BHIS323
BILE326
BTYR327
BLEU330
BPHE363
BHIS449
BASP475

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
ChainResidueDetails
AGLN286
AHIS323
AHIS449
ATYR473
BGLN286
BHIS323
BHIS449
BTYR473

site_idSWS_FT_FI2
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
ChainResidueDetails
ALYS224
BLYS224

226707

PDB entries from 2024-10-30

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