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6M6H

Structure of HSV2 C-capsid portal vertex

Functional Information from GO Data
ChainGOidnamespacecontents
A0005198molecular_functionstructural molecule activity
A0019028cellular_componentviral capsid
A0039622cellular_componentT=16 icosahedral viral capsid
A0042025cellular_componenthost cell nucleus
A0044423cellular_componentvirion component
B0005198molecular_functionstructural molecule activity
B0019028cellular_componentviral capsid
B0039622cellular_componentT=16 icosahedral viral capsid
B0042025cellular_componenthost cell nucleus
B0044423cellular_componentvirion component
C0005198molecular_functionstructural molecule activity
C0019028cellular_componentviral capsid
C0039622cellular_componentT=16 icosahedral viral capsid
C0042025cellular_componenthost cell nucleus
C0044423cellular_componentvirion component
D0005198molecular_functionstructural molecule activity
D0019028cellular_componentviral capsid
D0039622cellular_componentT=16 icosahedral viral capsid
D0042025cellular_componenthost cell nucleus
D0044423cellular_componentvirion component
E0005198molecular_functionstructural molecule activity
E0019028cellular_componentviral capsid
E0039622cellular_componentT=16 icosahedral viral capsid
E0042025cellular_componenthost cell nucleus
E0044423cellular_componentvirion component
F0005198molecular_functionstructural molecule activity
F0019028cellular_componentviral capsid
F0039622cellular_componentT=16 icosahedral viral capsid
F0042025cellular_componenthost cell nucleus
F0044423cellular_componentvirion component
G0019028cellular_componentviral capsid
G0042025cellular_componenthost cell nucleus
G0044423cellular_componentvirion component
G0051276biological_processchromosome organization
H0019028cellular_componentviral capsid
H0019072biological_processviral genome packaging
H0042025cellular_componenthost cell nucleus
H0043657cellular_componenthost cell
H0044423cellular_componentvirion component
H0046718biological_processsymbiont entry into host cell
H0075732biological_processviral penetration into host nucleus
I0019028cellular_componentviral capsid
I0019072biological_processviral genome packaging
I0042025cellular_componenthost cell nucleus
I0043657cellular_componenthost cell
I0044423cellular_componentvirion component
I0046718biological_processsymbiont entry into host cell
I0075732biological_processviral penetration into host nucleus
J0016032biological_processviral process
J0019028cellular_componentviral capsid
J0042025cellular_componenthost cell nucleus
J0044423cellular_componentvirion component
K0016032biological_processviral process
K0019028cellular_componentviral capsid
K0042025cellular_componenthost cell nucleus
K0044423cellular_componentvirion component
L0016032biological_processviral process
L0019028cellular_componentviral capsid
L0042025cellular_componenthost cell nucleus
L0044423cellular_componentvirion component
M0016032biological_processviral process
M0019028cellular_componentviral capsid
M0042025cellular_componenthost cell nucleus
M0044423cellular_componentvirion component
N0016032biological_processviral process
N0019028cellular_componentviral capsid
N0042025cellular_componenthost cell nucleus
N0044423cellular_componentvirion component
O0016032biological_processviral process
O0019028cellular_componentviral capsid
O0042025cellular_componenthost cell nucleus
O0044423cellular_componentvirion component
P0004843molecular_functioncysteine-type deubiquitinase activity
P0006508biological_processproteolysis
P0008233molecular_functionpeptidase activity
P0008234molecular_functioncysteine-type peptidase activity
P0016787molecular_functionhydrolase activity
P0019033cellular_componentviral tegument
P0019784molecular_functiondeNEDDylase activity
P0030430cellular_componenthost cell cytoplasm
P0039648biological_processsymbiont-mediated perturbation of host ubiquitin-like protein modification
P0039693biological_processviral DNA genome replication
P0042025cellular_componenthost cell nucleus
P0044423cellular_componentvirion component
Q0004843molecular_functioncysteine-type deubiquitinase activity
Q0006508biological_processproteolysis
Q0008233molecular_functionpeptidase activity
Q0008234molecular_functioncysteine-type peptidase activity
Q0016787molecular_functionhydrolase activity
Q0019033cellular_componentviral tegument
Q0019784molecular_functiondeNEDDylase activity
Q0030430cellular_componenthost cell cytoplasm
Q0039648biological_processsymbiont-mediated perturbation of host ubiquitin-like protein modification
Q0039693biological_processviral DNA genome replication
Q0042025cellular_componenthost cell nucleus
Q0044423cellular_componentvirion component
R0005198molecular_functionstructural molecule activity
R0019028cellular_componentviral capsid
R0042025cellular_componenthost cell nucleus
R0044423cellular_componentvirion component
S0005198molecular_functionstructural molecule activity
S0019028cellular_componentviral capsid
S0042025cellular_componenthost cell nucleus
S0044423cellular_componentvirion component
T0003677molecular_functionDNA binding
T0019028cellular_componentviral capsid
T0019069biological_processviral capsid assembly
T0042025cellular_componenthost cell nucleus
T0044423cellular_componentvirion component
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_04044
ChainResidueDetails
PCYS40
PASP172
PHIS174
QCYS40
QASP172
QHIS174

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Important for catalytic activity => ECO:0000255|HAMAP-Rule:MF_04044
ChainResidueDetails
PGLN27
QGLN27

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PDB entries from 2025-06-18

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