6M6G

Structure of HSV2 viron capsid portal vertex

Functional Information from GO Data

Chain	GOid	namespace	contents
B	0005198	molecular_function	structural molecule activity
B	0019028	cellular_component	viral capsid
B	0039622	cellular_component	T=16 icosahedral viral capsid
B	0042025	cellular_component	host cell nucleus
B	0044423	cellular_component	virion component
C	0005198	molecular_function	structural molecule activity
C	0019028	cellular_component	viral capsid
C	0039622	cellular_component	T=16 icosahedral viral capsid
C	0042025	cellular_component	host cell nucleus
C	0044423	cellular_component	virion component
D	0005198	molecular_function	structural molecule activity
D	0019028	cellular_component	viral capsid
D	0039622	cellular_component	T=16 icosahedral viral capsid
D	0042025	cellular_component	host cell nucleus
D	0044423	cellular_component	virion component
E	0005198	molecular_function	structural molecule activity
E	0019028	cellular_component	viral capsid
E	0039622	cellular_component	T=16 icosahedral viral capsid
E	0042025	cellular_component	host cell nucleus
E	0044423	cellular_component	virion component
F	0005198	molecular_function	structural molecule activity
F	0019028	cellular_component	viral capsid
F	0039622	cellular_component	T=16 icosahedral viral capsid
F	0042025	cellular_component	host cell nucleus
F	0044423	cellular_component	virion component
G	0016032	biological_process	viral process
G	0019028	cellular_component	viral capsid
G	0042025	cellular_component	host cell nucleus
G	0044423	cellular_component	virion component
I	0005198	molecular_function	structural molecule activity
I	0019028	cellular_component	viral capsid
I	0039622	cellular_component	T=16 icosahedral viral capsid
I	0042025	cellular_component	host cell nucleus
I	0044423	cellular_component	virion component
K	0005198	molecular_function	structural molecule activity
K	0019028	cellular_component	viral capsid
K	0042025	cellular_component	host cell nucleus
K	0044423	cellular_component	virion component
M	0016032	biological_process	viral process
M	0019028	cellular_component	viral capsid
M	0042025	cellular_component	host cell nucleus
M	0044423	cellular_component	virion component
O	0005198	molecular_function	structural molecule activity
O	0019028	cellular_component	viral capsid
O	0042025	cellular_component	host cell nucleus
O	0044423	cellular_component	virion component
Q	0016032	biological_process	viral process
Q	0019028	cellular_component	viral capsid
Q	0042025	cellular_component	host cell nucleus
Q	0044423	cellular_component	virion component
S	0003677	molecular_function	DNA binding
S	0019028	cellular_component	viral capsid
S	0019069	biological_process	viral capsid assembly
S	0042025	cellular_component	host cell nucleus
S	0044423	cellular_component	virion component
T	0016032	biological_process	viral process
T	0019028	cellular_component	viral capsid
T	0042025	cellular_component	host cell nucleus
T	0044423	cellular_component	virion component
U	0016032	biological_process	viral process
U	0019028	cellular_component	viral capsid
U	0042025	cellular_component	host cell nucleus
U	0044423	cellular_component	virion component
V	0016032	biological_process	viral process
V	0019028	cellular_component	viral capsid
V	0042025	cellular_component	host cell nucleus
V	0044423	cellular_component	virion component
k	0019028	cellular_component	viral capsid
k	0042025	cellular_component	host cell nucleus
k	0044423	cellular_component	virion component
k	0051276	biological_process	chromosome organization
l	0019028	cellular_component	viral capsid
l	0019072	biological_process	viral genome packaging
l	0042025	cellular_component	host cell nucleus
l	0043657	cellular_component	host cell
l	0044423	cellular_component	virion component
l	0046718	biological_process	symbiont entry into host cell
l	0075732	biological_process	viral penetration into host nucleus
m	0019028	cellular_component	viral capsid
m	0019072	biological_process	viral genome packaging
m	0042025	cellular_component	host cell nucleus
m	0043657	cellular_component	host cell
m	0044423	cellular_component	virion component
m	0046718	biological_process	symbiont entry into host cell
m	0075732	biological_process	viral penetration into host nucleus
n	0004843	molecular_function	cysteine-type deubiquitinase activity
n	0006508	biological_process	proteolysis
n	0008233	molecular_function	peptidase activity
n	0008234	molecular_function	cysteine-type peptidase activity
n	0016787	molecular_function	hydrolase activity
n	0019033	cellular_component	viral tegument
n	0019784	molecular_function	deNEDDylase activity
n	0030430	cellular_component	host cell cytoplasm
n	0039648	biological_process	symbiont-mediated perturbation of host ubiquitin-like protein modification
n	0039693	biological_process	viral DNA genome replication
n	0042025	cellular_component	host cell nucleus
n	0044423	cellular_component	virion component
o	0004843	molecular_function	cysteine-type deubiquitinase activity
o	0006508	biological_process	proteolysis
o	0008233	molecular_function	peptidase activity
o	0008234	molecular_function	cysteine-type peptidase activity
o	0016787	molecular_function	hydrolase activity
o	0019033	cellular_component	viral tegument
o	0019784	molecular_function	deNEDDylase activity
o	0030430	cellular_component	host cell cytoplasm
o	0039648	biological_process	symbiont-mediated perturbation of host ubiquitin-like protein modification
o	0039693	biological_process	viral DNA genome replication
o	0042025	cellular_component	host cell nucleus
o	0044423	cellular_component	virion component

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	48
Details	Region: {"description":"Interaction with major capsid protein/MCP","evidences":[{"source":"HAMAP-Rule","id":"MF_04025","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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