6LLB

Crystal structure of mpy-RNase J (mutant S247A), an archaeal RNase J from Methanolobus psychrophilus R15, in complex with 6 nt RNA

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0004518	molecular_function	nuclease activity
A	0004527	molecular_function	exonuclease activity
A	0004534	molecular_function	5'-3' RNA exonuclease activity
A	0005737	cellular_component	cytoplasm
A	0006401	biological_process	RNA catabolic process
A	0008270	molecular_function	zinc ion binding
A	0016787	molecular_function	hydrolase activity
A	0046872	molecular_function	metal ion binding
B	0003723	molecular_function	RNA binding
B	0004518	molecular_function	nuclease activity
B	0004527	molecular_function	exonuclease activity
B	0004534	molecular_function	5'-3' RNA exonuclease activity
B	0005737	cellular_component	cytoplasm
B	0006401	biological_process	RNA catabolic process
B	0008270	molecular_function	zinc ion binding
B	0016787	molecular_function	hydrolase activity
B	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	binding site for residue ZN A 501

Chain	Residue
A	ASP86
A	HIS87
A	ASP174
A	HIS410
A	ZN502
C	A2

---

site_id	AC2
Number of Residues	6
Details	binding site for residue ZN A 502

Chain	Residue
A	ASP174
A	ZN501
C	A2
A	HIS82
A	HIS84
A	HIS152

---

site_id	AC3
Number of Residues	2
Details	binding site for residue SO4 A 503

Chain	Residue
A	ARG36
A	ARG39

---

site_id	AC4
Number of Residues	3
Details	binding site for residue SO4 A 504

Chain	Residue
A	HIS52
A	ARG97
A	PHE122

---

site_id	AC5
Number of Residues	2
Details	binding site for residue SO4 A 505

Chain	Residue
A	ASN213
A	ARG391

---

site_id	AC6
Number of Residues	4
Details	binding site for residue SO4 A 506

Chain	Residue
A	HIS-15
A	HIS-15
A	HIS-17
A	HOH604

---

site_id	AC7
Number of Residues	4
Details	binding site for residue SO4 A 507

Chain	Residue
A	HIS-14
A	HIS-12
A	SER-11
A	HIS-13

---

site_id	AC8
Number of Residues	6
Details	binding site for residue ZN B 501

Chain	Residue
B	ASP86
B	HIS87
B	ASP174
B	HIS410
B	ZN502
D	A2

---

site_id	AC9
Number of Residues	6
Details	binding site for residue ZN B 502

Chain	Residue
B	HIS82
B	HIS84
B	HIS152
B	ASP174
B	ZN501
D	A2

---

site_id	AD1
Number of Residues	2
Details	binding site for residue SO4 B 503

Chain	Residue
B	ARG36
B	ARG39

---

site_id	AD2
Number of Residues	3
Details	binding site for residue SO4 B 504

Chain	Residue
B	ARG76
B	HIS96
B	ARG97

---

site_id	AD3
Number of Residues	3
Details	binding site for residue SO4 B 505

Chain	Residue
A	LYS373
B	ASN213
B	ARG391

---

site_id	AD4
Number of Residues	2
Details	binding site for residue SO4 B 506

Chain	Residue
B	HIS223
B	LYS227

---