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6LA9

349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0 (high cryoprotectant)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000786cellular_componentnucleosome
A0003677molecular_functionDNA binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005694cellular_componentchromosome
A0006325biological_processchromatin organization
A0006334biological_processnucleosome assembly
A0010467biological_processgene expression
A0016020cellular_componentmembrane
A0030527molecular_functionstructural constituent of chromatin
A0032200biological_processtelomere organization
A0032991cellular_componentprotein-containing complex
A0040029biological_processepigenetic regulation of gene expression
A0043229cellular_componentintracellular organelle
A0045296molecular_functioncadherin binding
A0046982molecular_functionprotein heterodimerization activity
A0070062cellular_componentextracellular exosome
B0000781cellular_componentchromosome, telomeric region
B0000786cellular_componentnucleosome
B0003677molecular_functionDNA binding
B0003723molecular_functionRNA binding
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005694cellular_componentchromosome
B0006325biological_processchromatin organization
B0006334biological_processnucleosome assembly
B0016020cellular_componentmembrane
B0030527molecular_functionstructural constituent of chromatin
B0032200biological_processtelomere organization
B0032991cellular_componentprotein-containing complex
B0043505cellular_componentCENP-A containing nucleosome
B0045653biological_processnegative regulation of megakaryocyte differentiation
B0046982molecular_functionprotein heterodimerization activity
B0061644biological_processprotein localization to CENP-A containing chromatin
B0070062cellular_componentextracellular exosome
C0000786cellular_componentnucleosome
C0003677molecular_functionDNA binding
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005694cellular_componentchromosome
C0006325biological_processchromatin organization
C0008285biological_processnegative regulation of cell population proliferation
C0030527molecular_functionstructural constituent of chromatin
C0031492molecular_functionnucleosomal DNA binding
C0043229cellular_componentintracellular organelle
C0043505cellular_componentCENP-A containing nucleosome
C0046982molecular_functionprotein heterodimerization activity
C0061644biological_processprotein localization to CENP-A containing chromatin
C0070062cellular_componentextracellular exosome
C0070828biological_processheterochromatin organization
D0000786cellular_componentnucleosome
D0001530molecular_functionlipopolysaccharide binding
D0002227biological_processinnate immune response in mucosa
D0003677molecular_functionDNA binding
D0005515molecular_functionprotein binding
D0005615cellular_componentextracellular space
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005694cellular_componentchromosome
D0005829cellular_componentcytosol
D0005886cellular_componentplasma membrane
D0006325biological_processchromatin organization
D0006334biological_processnucleosome assembly
D0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
D0019731biological_processantibacterial humoral response
D0030527molecular_functionstructural constituent of chromatin
D0031640biological_processkilling of cells of another organism
D0042742biological_processdefense response to bacterium
D0043229cellular_componentintracellular organelle
D0043505cellular_componentCENP-A containing nucleosome
D0046982molecular_functionprotein heterodimerization activity
D0050829biological_processdefense response to Gram-negative bacterium
D0050830biological_processdefense response to Gram-positive bacterium
D0061644biological_processprotein localization to CENP-A containing chromatin
D0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
E0000786cellular_componentnucleosome
E0003677molecular_functionDNA binding
E0005515molecular_functionprotein binding
E0005576cellular_componentextracellular region
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005694cellular_componentchromosome
E0006325biological_processchromatin organization
E0006334biological_processnucleosome assembly
E0010467biological_processgene expression
E0016020cellular_componentmembrane
E0030527molecular_functionstructural constituent of chromatin
E0032200biological_processtelomere organization
E0032991cellular_componentprotein-containing complex
E0040029biological_processepigenetic regulation of gene expression
E0043229cellular_componentintracellular organelle
E0045296molecular_functioncadherin binding
E0046982molecular_functionprotein heterodimerization activity
E0070062cellular_componentextracellular exosome
F0000781cellular_componentchromosome, telomeric region
F0000786cellular_componentnucleosome
F0003677molecular_functionDNA binding
F0003723molecular_functionRNA binding
F0005515molecular_functionprotein binding
F0005576cellular_componentextracellular region
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005694cellular_componentchromosome
F0006325biological_processchromatin organization
F0006334biological_processnucleosome assembly
F0016020cellular_componentmembrane
F0030527molecular_functionstructural constituent of chromatin
F0032200biological_processtelomere organization
F0032991cellular_componentprotein-containing complex
F0043505cellular_componentCENP-A containing nucleosome
F0045653biological_processnegative regulation of megakaryocyte differentiation
F0046982molecular_functionprotein heterodimerization activity
F0061644biological_processprotein localization to CENP-A containing chromatin
F0070062cellular_componentextracellular exosome
G0000786cellular_componentnucleosome
G0003677molecular_functionDNA binding
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005694cellular_componentchromosome
G0006325biological_processchromatin organization
G0008285biological_processnegative regulation of cell population proliferation
G0030527molecular_functionstructural constituent of chromatin
G0031492molecular_functionnucleosomal DNA binding
G0043229cellular_componentintracellular organelle
G0043505cellular_componentCENP-A containing nucleosome
G0046982molecular_functionprotein heterodimerization activity
G0061644biological_processprotein localization to CENP-A containing chromatin
G0070062cellular_componentextracellular exosome
G0070828biological_processheterochromatin organization
H0000786cellular_componentnucleosome
H0001530molecular_functionlipopolysaccharide binding
H0002227biological_processinnate immune response in mucosa
H0003677molecular_functionDNA binding
H0005515molecular_functionprotein binding
H0005615cellular_componentextracellular space
H0005634cellular_componentnucleus
H0005654cellular_componentnucleoplasm
H0005694cellular_componentchromosome
H0005829cellular_componentcytosol
H0005886cellular_componentplasma membrane
H0006325biological_processchromatin organization
H0006334biological_processnucleosome assembly
H0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
H0019731biological_processantibacterial humoral response
H0030527molecular_functionstructural constituent of chromatin
H0031640biological_processkilling of cells of another organism
H0042742biological_processdefense response to bacterium
H0043229cellular_componentintracellular organelle
H0043505cellular_componentCENP-A containing nucleosome
H0046982molecular_functionprotein heterodimerization activity
H0050829biological_processdefense response to Gram-negative bacterium
H0050830biological_processdefense response to Gram-positive bacterium
H0061644biological_processprotein localization to CENP-A containing chromatin
H0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
K0000786cellular_componentnucleosome
K0003677molecular_functionDNA binding
K0005515molecular_functionprotein binding
K0005576cellular_componentextracellular region
K0005634cellular_componentnucleus
K0005654cellular_componentnucleoplasm
K0005694cellular_componentchromosome
K0006325biological_processchromatin organization
K0006334biological_processnucleosome assembly
K0010467biological_processgene expression
K0016020cellular_componentmembrane
K0030527molecular_functionstructural constituent of chromatin
K0032200biological_processtelomere organization
K0032991cellular_componentprotein-containing complex
K0040029biological_processepigenetic regulation of gene expression
K0043229cellular_componentintracellular organelle
K0045296molecular_functioncadherin binding
K0046982molecular_functionprotein heterodimerization activity
K0070062cellular_componentextracellular exosome
L0000781cellular_componentchromosome, telomeric region
L0000786cellular_componentnucleosome
L0003677molecular_functionDNA binding
L0003723molecular_functionRNA binding
L0005515molecular_functionprotein binding
L0005576cellular_componentextracellular region
L0005634cellular_componentnucleus
L0005654cellular_componentnucleoplasm
L0005694cellular_componentchromosome
L0006325biological_processchromatin organization
L0006334biological_processnucleosome assembly
L0016020cellular_componentmembrane
L0030527molecular_functionstructural constituent of chromatin
L0032200biological_processtelomere organization
L0032991cellular_componentprotein-containing complex
L0043505cellular_componentCENP-A containing nucleosome
L0045653biological_processnegative regulation of megakaryocyte differentiation
L0046982molecular_functionprotein heterodimerization activity
L0061644biological_processprotein localization to CENP-A containing chromatin
L0070062cellular_componentextracellular exosome
M0000786cellular_componentnucleosome
M0003677molecular_functionDNA binding
M0005515molecular_functionprotein binding
M0005634cellular_componentnucleus
M0005694cellular_componentchromosome
M0006325biological_processchromatin organization
M0008285biological_processnegative regulation of cell population proliferation
M0030527molecular_functionstructural constituent of chromatin
M0031492molecular_functionnucleosomal DNA binding
M0043229cellular_componentintracellular organelle
M0043505cellular_componentCENP-A containing nucleosome
M0046982molecular_functionprotein heterodimerization activity
M0061644biological_processprotein localization to CENP-A containing chromatin
M0070062cellular_componentextracellular exosome
M0070828biological_processheterochromatin organization
N0000786cellular_componentnucleosome
N0001530molecular_functionlipopolysaccharide binding
N0002227biological_processinnate immune response in mucosa
N0003677molecular_functionDNA binding
N0005515molecular_functionprotein binding
N0005615cellular_componentextracellular space
N0005634cellular_componentnucleus
N0005654cellular_componentnucleoplasm
N0005694cellular_componentchromosome
N0005829cellular_componentcytosol
N0005886cellular_componentplasma membrane
N0006325biological_processchromatin organization
N0006334biological_processnucleosome assembly
N0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
N0019731biological_processantibacterial humoral response
N0030527molecular_functionstructural constituent of chromatin
N0031640biological_processkilling of cells of another organism
N0042742biological_processdefense response to bacterium
N0043229cellular_componentintracellular organelle
N0043505cellular_componentCENP-A containing nucleosome
N0046982molecular_functionprotein heterodimerization activity
N0050829biological_processdefense response to Gram-negative bacterium
N0050830biological_processdefense response to Gram-positive bacterium
N0061644biological_processprotein localization to CENP-A containing chromatin
N0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
O0000786cellular_componentnucleosome
O0003677molecular_functionDNA binding
O0005515molecular_functionprotein binding
O0005576cellular_componentextracellular region
O0005634cellular_componentnucleus
O0005654cellular_componentnucleoplasm
O0005694cellular_componentchromosome
O0006325biological_processchromatin organization
O0006334biological_processnucleosome assembly
O0010467biological_processgene expression
O0016020cellular_componentmembrane
O0030527molecular_functionstructural constituent of chromatin
O0032200biological_processtelomere organization
O0032991cellular_componentprotein-containing complex
O0040029biological_processepigenetic regulation of gene expression
O0043229cellular_componentintracellular organelle
O0045296molecular_functioncadherin binding
O0046982molecular_functionprotein heterodimerization activity
O0070062cellular_componentextracellular exosome
P0000781cellular_componentchromosome, telomeric region
P0000786cellular_componentnucleosome
P0003677molecular_functionDNA binding
P0003723molecular_functionRNA binding
P0005515molecular_functionprotein binding
P0005576cellular_componentextracellular region
P0005634cellular_componentnucleus
P0005654cellular_componentnucleoplasm
P0005694cellular_componentchromosome
P0006325biological_processchromatin organization
P0006334biological_processnucleosome assembly
P0016020cellular_componentmembrane
P0030527molecular_functionstructural constituent of chromatin
P0032200biological_processtelomere organization
P0032991cellular_componentprotein-containing complex
P0043505cellular_componentCENP-A containing nucleosome
P0045653biological_processnegative regulation of megakaryocyte differentiation
P0046982molecular_functionprotein heterodimerization activity
P0061644biological_processprotein localization to CENP-A containing chromatin
P0070062cellular_componentextracellular exosome
Q0000786cellular_componentnucleosome
Q0003677molecular_functionDNA binding
Q0005515molecular_functionprotein binding
Q0005634cellular_componentnucleus
Q0005694cellular_componentchromosome
Q0006325biological_processchromatin organization
Q0008285biological_processnegative regulation of cell population proliferation
Q0030527molecular_functionstructural constituent of chromatin
Q0031492molecular_functionnucleosomal DNA binding
Q0043229cellular_componentintracellular organelle
Q0043505cellular_componentCENP-A containing nucleosome
Q0046982molecular_functionprotein heterodimerization activity
Q0061644biological_processprotein localization to CENP-A containing chromatin
Q0070062cellular_componentextracellular exosome
Q0070828biological_processheterochromatin organization
R0000786cellular_componentnucleosome
R0001530molecular_functionlipopolysaccharide binding
R0002227biological_processinnate immune response in mucosa
R0003677molecular_functionDNA binding
R0005515molecular_functionprotein binding
R0005615cellular_componentextracellular space
R0005634cellular_componentnucleus
R0005654cellular_componentnucleoplasm
R0005694cellular_componentchromosome
R0005829cellular_componentcytosol
R0005886cellular_componentplasma membrane
R0006325biological_processchromatin organization
R0006334biological_processnucleosome assembly
R0010804biological_processnegative regulation of tumor necrosis factor-mediated signaling pathway
R0019731biological_processantibacterial humoral response
R0030527molecular_functionstructural constituent of chromatin
R0031640biological_processkilling of cells of another organism
R0042742biological_processdefense response to bacterium
R0043229cellular_componentintracellular organelle
R0043505cellular_componentCENP-A containing nucleosome
R0046982molecular_functionprotein heterodimerization activity
R0050829biological_processdefense response to Gram-negative bacterium
R0050830biological_processdefense response to Gram-positive bacterium
R0061644biological_processprotein localization to CENP-A containing chromatin
R0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
S0000785cellular_componentchromatin
S0000786cellular_componentnucleosome
S0000791cellular_componenteuchromatin
S0003677molecular_functionDNA binding
S0003680molecular_functionminor groove of adenine-thymine-rich DNA binding
S0003690molecular_functiondouble-stranded DNA binding
S0003723molecular_functionRNA binding
S0005515molecular_functionprotein binding
S0005634cellular_componentnucleus
S0005654cellular_componentnucleoplasm
S0005694cellular_componentchromosome
S0005794cellular_componentGolgi apparatus
S0006334biological_processnucleosome assembly
S0015629cellular_componentactin cytoskeleton
S0016604cellular_componentnuclear body
S0017053cellular_componenttranscription repressor complex
S0030261biological_processchromosome condensation
S0030527molecular_functionstructural constituent of chromatin
S0031490molecular_functionchromatin DNA binding
S0031491molecular_functionnucleosome binding
S0031492molecular_functionnucleosomal DNA binding
S0031507biological_processheterochromatin formation
S0045910biological_processnegative regulation of DNA recombination
S2000679biological_processpositive regulation of transcription regulatory region DNA binding
T0000785cellular_componentchromatin
T0000786cellular_componentnucleosome
T0000791cellular_componenteuchromatin
T0003677molecular_functionDNA binding
T0003680molecular_functionminor groove of adenine-thymine-rich DNA binding
T0003690molecular_functiondouble-stranded DNA binding
T0003723molecular_functionRNA binding
T0005515molecular_functionprotein binding
T0005634cellular_componentnucleus
T0005654cellular_componentnucleoplasm
T0005694cellular_componentchromosome
T0005794cellular_componentGolgi apparatus
T0006334biological_processnucleosome assembly
T0015629cellular_componentactin cytoskeleton
T0016604cellular_componentnuclear body
T0017053cellular_componenttranscription repressor complex
T0030261biological_processchromosome condensation
T0030527molecular_functionstructural constituent of chromatin
T0031490molecular_functionchromatin DNA binding
T0031491molecular_functionnucleosome binding
T0031492molecular_functionnucleosomal DNA binding
T0031507biological_processheterochromatin formation
T0045910biological_processnegative regulation of DNA recombination
T2000679biological_processpositive regulation of transcription regulatory region DNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue CA A 201
ChainResidue
AASP77
JDC24

site_idAC2
Number of Residues1
Detailsbinding site for residue CA G 201
ChainResidue
GGLU41

site_idAC3
Number of Residues3
Detailsbinding site for residue CA G 202
ChainResidue
GGLU64
HVAL48
HHIS49

site_idAC4
Number of Residues1
Detailsbinding site for residue CA I 401
ChainResidue
IDG316

site_idAC5
Number of Residues3
Detailsbinding site for residue CA I 402
ChainResidue
JDG311
IDG34
IDC35

site_idAC6
Number of Residues1
Detailsbinding site for residue CA I 403
ChainResidue
IDC203

site_idAC7
Number of Residues2
Detailsbinding site for residue CA I 404
ChainResidue
IDG211
JDG134

site_idAC8
Number of Residues1
Detailsbinding site for residue CA I 406
ChainResidue
IDG308

site_idAC9
Number of Residues1
Detailsbinding site for residue CA I 413
ChainResidue
IDG148

site_idAD1
Number of Residues2
Detailsbinding site for residue CA I 415
ChainResidue
IDG37
IDC38

site_idAD2
Number of Residues1
Detailsbinding site for residue CA J 401
ChainResidue
JDC300

site_idAD3
Number of Residues1
Detailsbinding site for residue CA J 403
ChainResidue
JDA83

site_idAD4
Number of Residues1
Detailsbinding site for residue CA J 404
ChainResidue
JHOH501

site_idAD5
Number of Residues1
Detailsbinding site for residue CA J 405
ChainResidue
JDT265

site_idAD6
Number of Residues1
Detailsbinding site for residue CA J 406
ChainResidue
IDG318

site_idAD7
Number of Residues2
Detailsbinding site for residue CA J 407
ChainResidue
JDC315
JDG316

site_idAD8
Number of Residues2
Detailsbinding site for residue CA J 408
ChainResidue
JDA307
JDG308

site_idAD9
Number of Residues1
Detailsbinding site for residue CA J 409
ChainResidue
JDG25

site_idAE1
Number of Residues4
Detailsbinding site for residue CA J 410
ChainResidue
IDC311
IDG312
JDC34
JDG35

site_idAE2
Number of Residues1
Detailsbinding site for residue CA J 411
ChainResidue
JDC220

site_idAE3
Number of Residues2
Detailsbinding site for residue CA J 412
ChainResidue
IDC267
JDG79

site_idAE4
Number of Residues1
Detailsbinding site for residue CA J 413
ChainResidue
JDC249

site_idAE5
Number of Residues1
Detailsbinding site for residue CA J 414
ChainResidue
JDG142

site_idAE6
Number of Residues1
Detailsbinding site for residue CA J 415
ChainResidue
JDT339

site_idAE7
Number of Residues4
Detailsbinding site for residue CA O 201
ChainResidue
IDG287
JDT335
OASP81
PLYS79

site_idAE8
Number of Residues3
Detailsbinding site for residue CA O 202
ChainResidue
JDT337
OGLN76
OASP77

site_idAE9
Number of Residues1
Detailsbinding site for residue CA O 203
ChainResidue
OASP81

site_idAF1
Number of Residues1
Detailsbinding site for residue CA O 204
ChainResidue
OASP77

site_idAF2
Number of Residues2
Detailsbinding site for residue CA Q 201
ChainResidue
CASP72
QGLY22

Functional Information from PROSITE/UniProt
site_idPS00047
Number of Residues5
DetailsHISTONE_H4 Histone H4 signature. GAKRH
ChainResidueDetails
BGLY14-HIS18

site_idPS00046
Number of Residues7
DetailsHISTONE_H2A Histone H2A signature. AGLqFPV
ChainResidueDetails
CALA21-VAL27

site_idPS00357
Number of Residues23
DetailsHISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
ChainResidueDetails
DARG92-GLY114

site_idPS00322
Number of Residues7
DetailsHISTONE_H3_1 Histone H3 signature 1. KAPRKQL
ChainResidueDetails
ALYS14-LEU20

site_idPS00959
Number of Residues9
DetailsHISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
ChainResidueDetails
APRO66-ILE74

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330
ChainResidueDetails
SMET1
TMET1
NPRO1
RPRO1

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N-acetylthreonine; partial; in Histone H1.0, N-terminally processed => ECO:0000269|PubMed:9582379, ECO:0007744|PubMed:19413330
ChainResidueDetails
STHR2
TTHR2
NGLU2
RGLU2

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Deamidated asparagine; partial => ECO:0000269|PubMed:9582379
ChainResidueDetails
SASN4
HLYS11
HLYS15
HLYS16
HLYS20
HLYS23
HLYS43
HLYS85
NLYS5
NLYS11
NLYS15
TASN4
NLYS16
NLYS20
NLYS23
NLYS43
NLYS85
RLYS5
RLYS11
RLYS15
RLYS16
RLYS20
DLYS15
RLYS23
RLYS43
RLYS85
DLYS16
DLYS20
DLYS23
DLYS43
DLYS85
HLYS5

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Citrulline => ECO:0000250|UniProtKB:P43275
ChainResidueDetails
SARG42
TARG42
NSER6
RSER6
MLYS9
MLYS95
QLYS9
QLYS95

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: ADP-ribosylserine => ECO:0000269|PubMed:27723750
ChainResidueDetails
SSER104
PLYS8
PLYS16
PLYS44
TSER104
NLYS12
RLYS12
FLYS16
FLYS44
LLYS8
LLYS16
LLYS44

site_idSWS_FT_FI6
Number of Residues4
DetailsMOD_RES: Phosphoserine; by STK4/MST1 => ECO:0000269|PubMed:12757711
ChainResidueDetails
DSER14
LLYS31
LLYS77
LLYS91
PLYS12
PLYS31
PLYS77
PLYS91
HSER14
NSER14
RSER14
FLYS12
FLYS31
FLYS77
FLYS91
LLYS12

site_idSWS_FT_FI7
Number of Residues4
DetailsMOD_RES: N6-(2-hydroxyisobutyryl)lysine => ECO:0000269|PubMed:24681537
ChainResidueDetails
DLYS24
HLYS24
NLYS24
RLYS24
MLYS74
MLYS75
QLYS74
QLYS75

site_idSWS_FT_FI8
Number of Residues12
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435
ChainResidueDetails
DLYS34
RLYS34
RLYS116
RLYS120
DLYS116
DLYS120
HLYS34
HLYS116
HLYS120
NLYS34
NLYS116
NLYS120

site_idSWS_FT_FI9
Number of Residues4
DetailsMOD_RES: PolyADP-ribosyl glutamic acid => ECO:0000250|UniProtKB:Q64475
ChainResidueDetails
DGLU35
QLYS118
QLYS119
QLYS125
HGLU35
NGLU35
RGLU35
GLYS119
GLYS125
MLYS118
MLYS119
MLYS125

site_idSWS_FT_FI10
Number of Residues4
DetailsMOD_RES: Phosphoserine; by AMPK => ECO:0000250|UniProtKB:Q64475
ChainResidueDetails
DSER36
HSER36
NSER36
RSER36
KLYS14
KLYS56
OLYS14
OLYS56

site_idSWS_FT_FI11
Number of Residues8
DetailsMOD_RES: N6-methyllysine; alternate => ECO:0000269|PubMed:16627869
ChainResidueDetails
DLYS46
DLYS108
HLYS46
HLYS108
NLYS46
NLYS108
RLYS46
RLYS108

site_idSWS_FT_FI12
Number of Residues4
DetailsMOD_RES: N6-(2-hydroxyisobutyryl)lysine; alternate => ECO:0000269|PubMed:24681537
ChainResidueDetails
DLYS57
HLYS57
NLYS57
RLYS57
KLYS18
MLYS119
OLYS18
QLYS119

site_idSWS_FT_FI13
Number of Residues4
DetailsMOD_RES: Dimethylated arginine => ECO:0000250|UniProtKB:Q96A08
ChainResidueDetails
DARG79
HARG79
NARG79
RARG79

site_idSWS_FT_FI14
Number of Residues8
DetailsMOD_RES: Omega-N-methylarginine => ECO:0000250|UniProtKB:Q96A08
ChainResidueDetails
DARG86
DARG92
HARG86
HARG92
NARG86
NARG92
RARG86
RARG92

site_idSWS_FT_FI15
Number of Residues4
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q00729
ChainResidueDetails
DTHR115
HTHR115
NTHR115
RTHR115
LLYS91
PLYS91

site_idSWS_FT_FI16
Number of Residues4
DetailsCARBOHYD: O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
ChainResidueDetails
DSER112
PLYS20
PLYS59
PLYS79
HSER112
NSER112
RSER112
FLYS59
FLYS79
LLYS20
LLYS59
LLYS79

site_idSWS_FT_FI17
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250|UniProtKB:P58876
ChainResidueDetails
DLYS5
HLYS5
NLYS5
RLYS5

site_idSWS_FT_FI18
Number of Residues8
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:16307923, ECO:0000269|PubMed:16627869, ECO:0000269|PubMed:16713563
ChainResidueDetails
ALYS37
DLYS120
KLYS37
HLYS120
NLYS120
RLYS120

site_idSWS_FT_FI19
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250|UniProtKB:Q5QNW6
ChainResidueDetails
DLYS20
HLYS20
NLYS20
RLYS20

site_idSWS_FT_FI20
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:21726816
ChainResidueDetails
DLYS34
HLYS34
NLYS34
RLYS34

site_idSWS_FT_FI21
Number of Residues4
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:29211711
ChainResidueDetails
ALYS79
ELYS79
KLYS79
OLYS79

site_idSWS_FT_FI22
Number of Residues4
DetailsMOD_RES: Phosphothreonine => ECO:0000269|PubMed:20850016
ChainResidueDetails
ATHR80
ETHR80
KTHR80
OTHR80

site_idSWS_FT_FI23
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P84243
ChainResidueDetails
ASER86
ESER86
KSER86
OSER86

site_idSWS_FT_FI24
Number of Residues4
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
ChainResidueDetails
ATHR107
ETHR107
KTHR107
OTHR107

site_idSWS_FT_FI25
Number of Residues4
DetailsMOD_RES: N6-glutaryllysine; alternate => ECO:0000269|PubMed:31542297
ChainResidueDetails
ALYS115
ELYS115
KLYS115
OLYS115

site_idSWS_FT_FI26
Number of Residues4
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:22389435, ECO:0000269|PubMed:27436229
ChainResidueDetails
ALYS122
ELYS122
KLYS122
OLYS122

site_idSWS_FT_FI27
Number of Residues4
DetailsLIPID: N6-decanoyllysine => ECO:0000269|PubMed:35939806
ChainResidueDetails
ALYS18
ELYS18
KLYS18
OLYS18

218853

PDB entries from 2024-04-24

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