6L7L
Crystal structure of Ribonucleotide reductase R1 subunit, RRM1 in complex with 5-chloro-2-(N-((1S,2R)-2-(2,3-dihydro-1H-inden-4-yl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)sulfamoyl)benzamide
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004748 | molecular_function | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor |
| A | 0005524 | molecular_function | ATP binding |
| A | 0009263 | biological_process | deoxyribonucleotide biosynthetic process |
| E | 0004748 | molecular_function | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor |
| E | 0005524 | molecular_function | ATP binding |
| E | 0009263 | biological_process | deoxyribonucleotide biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 1 |
| Details | binding site for residue MG A 801 |
| site_id | AC2 |
| Number of Residues | 15 |
| Details | binding site for residue TTP A 802 |
| Chain | Residue |
| A | ASN270 |
| A | MG801 |
| A | HOH913 |
| E | LYS243 |
| E | TYR285 |
| E | VAL286 |
| E | ASP287 |
| A | ASP226 |
| A | SER227 |
| A | ILE228 |
| A | ILE231 |
| A | ARG256 |
| A | ILE262 |
| A | ALA263 |
| A | SER269 |
| site_id | AC3 |
| Number of Residues | 11 |
| Details | binding site for residue E6O A 803 |
| Chain | Residue |
| A | TRP684 |
| A | GLU685 |
| A | ILE686 |
| A | SER687 |
| A | GLN688 |
| A | LYS689 |
| A | HIS711 |
| A | ILE712 |
| A | ALA713 |
| A | LYS719 |
| A | MET723 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue ACT A 804 |
| Chain | Residue |
| A | THR199 |
| A | SER448 |
| A | MET602 |
| A | THR607 |
| A | HOH932 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue ACT A 805 |
| Chain | Residue |
| A | GLN530 |
| A | THR576 |
| A | ASP577 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue ACT A 806 |
| Chain | Residue |
| A | SER202 |
| A | SER606 |
| A | HOH932 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue ACT A 807 |
| Chain | Residue |
| A | ARG413 |
| A | LYS414 |
| A | GLY731 |
| A | ACT808 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue ACT A 808 |
| Chain | Residue |
| A | TRP728 |
| A | ACT807 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue MG E 801 |
| site_id | AD1 |
| Number of Residues | 13 |
| Details | binding site for residue TTP E 802 |
| Chain | Residue |
| A | LYS243 |
| A | TYR285 |
| A | VAL286 |
| A | ASP287 |
| E | ASP226 |
| E | SER227 |
| E | ILE228 |
| E | ILE231 |
| E | ARG256 |
| E | ILE262 |
| E | SER269 |
| E | ASN270 |
| E | MG801 |
| site_id | AD2 |
| Number of Residues | 11 |
| Details | binding site for residue E6O E 803 |
| Chain | Residue |
| E | VAL683 |
| E | TRP684 |
| E | GLU685 |
| E | ILE686 |
| E | SER687 |
| E | GLN688 |
| E | LYS689 |
| E | HIS711 |
| E | ALA713 |
| E | LYS719 |
| E | MET723 |
| site_id | AD3 |
| Number of Residues | 7 |
| Details | binding site for residue ACT E 804 |
| Chain | Residue |
| E | ALA447 |
| E | SER448 |
| E | THR604 |
| E | THR607 |
| E | HOH906 |
| E | HOH967 |
| E | HOH968 |
| site_id | AD4 |
| Number of Residues | 2 |
| Details | binding site for residue ACT E 805 |
| Chain | Residue |
| E | GLN530 |
| E | ASP577 |
| site_id | AD5 |
| Number of Residues | 5 |
| Details | binding site for residue ACT E 806 |
| Chain | Residue |
| E | SER202 |
| E | SER606 |
| E | HOH906 |
| E | HOH967 |
| E | HOH984 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue ACT E 807 |
| Chain | Residue |
| E | ARG413 |
| E | LYS414 |
| E | ACT808 |
| site_id | AD7 |
| Number of Residues | 2 |
| Details | binding site for residue ACT E 808 |
| Chain | Residue |
| E | TRP728 |
| E | ACT807 |
Functional Information from PROSITE/UniProt
| site_id | PS00089 |
| Number of Residues | 23 |
| Details | RIBORED_LARGE Ribonucleotide reductase large subunit signature. WkvLkekiakyGIRNsllIApmP |
| Chain | Residue | Details |
| A | TRP581-PRO603 | |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Cysteine radical intermediate","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| site_id | SWS_FT_FI3 |
| Number of Residues | 14 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"3HND","evidenceCode":"ECO:0007744"}]} |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"3HNE","evidenceCode":"ECO:0007744"}]} |
| site_id | SWS_FT_FI5 |
| Number of Residues | 4 |
| Details | Site: {"description":"Important for hydrogen atom transfer","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| site_id | SWS_FT_FI6 |
| Number of Residues | 4 |
| Details | Site: {"description":"Important for electron transfer","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |