6L7L
Crystal structure of Ribonucleotide reductase R1 subunit, RRM1 in complex with 5-chloro-2-(N-((1S,2R)-2-(2,3-dihydro-1H-inden-4-yl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)sulfamoyl)benzamide
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004748 | molecular_function | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor |
A | 0005524 | molecular_function | ATP binding |
A | 0009263 | biological_process | deoxyribonucleotide biosynthetic process |
E | 0004748 | molecular_function | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor |
E | 0005524 | molecular_function | ATP binding |
E | 0009263 | biological_process | deoxyribonucleotide biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 1 |
Details | binding site for residue MG A 801 |
site_id | AC2 |
Number of Residues | 15 |
Details | binding site for residue TTP A 802 |
Chain | Residue |
A | ASN270 |
A | MG801 |
A | HOH913 |
E | LYS243 |
E | TYR285 |
E | VAL286 |
E | ASP287 |
A | ASP226 |
A | SER227 |
A | ILE228 |
A | ILE231 |
A | ARG256 |
A | ILE262 |
A | ALA263 |
A | SER269 |
site_id | AC3 |
Number of Residues | 11 |
Details | binding site for residue E6O A 803 |
Chain | Residue |
A | TRP684 |
A | GLU685 |
A | ILE686 |
A | SER687 |
A | GLN688 |
A | LYS689 |
A | HIS711 |
A | ILE712 |
A | ALA713 |
A | LYS719 |
A | MET723 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue ACT A 804 |
Chain | Residue |
A | THR199 |
A | SER448 |
A | MET602 |
A | THR607 |
A | HOH932 |
site_id | AC5 |
Number of Residues | 3 |
Details | binding site for residue ACT A 805 |
Chain | Residue |
A | GLN530 |
A | THR576 |
A | ASP577 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue ACT A 806 |
Chain | Residue |
A | SER202 |
A | SER606 |
A | HOH932 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue ACT A 807 |
Chain | Residue |
A | ARG413 |
A | LYS414 |
A | GLY731 |
A | ACT808 |
site_id | AC8 |
Number of Residues | 2 |
Details | binding site for residue ACT A 808 |
Chain | Residue |
A | TRP728 |
A | ACT807 |
site_id | AC9 |
Number of Residues | 1 |
Details | binding site for residue MG E 801 |
site_id | AD1 |
Number of Residues | 13 |
Details | binding site for residue TTP E 802 |
Chain | Residue |
A | LYS243 |
A | TYR285 |
A | VAL286 |
A | ASP287 |
E | ASP226 |
E | SER227 |
E | ILE228 |
E | ILE231 |
E | ARG256 |
E | ILE262 |
E | SER269 |
E | ASN270 |
E | MG801 |
site_id | AD2 |
Number of Residues | 11 |
Details | binding site for residue E6O E 803 |
Chain | Residue |
E | VAL683 |
E | TRP684 |
E | GLU685 |
E | ILE686 |
E | SER687 |
E | GLN688 |
E | LYS689 |
E | HIS711 |
E | ALA713 |
E | LYS719 |
E | MET723 |
site_id | AD3 |
Number of Residues | 7 |
Details | binding site for residue ACT E 804 |
Chain | Residue |
E | ALA447 |
E | SER448 |
E | THR604 |
E | THR607 |
E | HOH906 |
E | HOH967 |
E | HOH968 |
site_id | AD4 |
Number of Residues | 2 |
Details | binding site for residue ACT E 805 |
Chain | Residue |
E | GLN530 |
E | ASP577 |
site_id | AD5 |
Number of Residues | 5 |
Details | binding site for residue ACT E 806 |
Chain | Residue |
E | SER202 |
E | SER606 |
E | HOH906 |
E | HOH967 |
E | HOH984 |
site_id | AD6 |
Number of Residues | 3 |
Details | binding site for residue ACT E 807 |
Chain | Residue |
E | ARG413 |
E | LYS414 |
E | ACT808 |
site_id | AD7 |
Number of Residues | 2 |
Details | binding site for residue ACT E 808 |
Chain | Residue |
E | TRP728 |
E | ACT807 |
Functional Information from PROSITE/UniProt
site_id | PS00089 |
Number of Residues | 23 |
Details | RIBORED_LARGE Ribonucleotide reductase large subunit signature. WkvLkekiakyGIRNsllIApmP |
Chain | Residue | Details |
A | TRP581-PRO603 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton acceptor => ECO:0000250 |
Chain | Residue | Details |
A | ASN427 | |
A | GLU431 | |
E | ASN427 | |
E | GLU431 | |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Cysteine radical intermediate => ECO:0000250 |
Chain | Residue | Details |
A | CYS429 | |
E | CYS429 | |
Chain | Residue | Details |
A | SER202 | |
E | THR604 | |
A | SER217 | |
A | ASN427 | |
A | GLU431 | |
A | THR604 | |
E | SER202 | |
E | SER217 | |
E | ASN427 | |
E | GLU431 | |
Chain | Residue | Details |
A | ASP226 | |
A | LYS243 | |
A | ARG256 | |
A | ALA263 | |
E | ASP226 | |
E | LYS243 | |
E | ARG256 | |
E | ALA263 | |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | SITE: Important for hydrogen atom transfer => ECO:0000250 |
Chain | Residue | Details |
A | CYS218 | |
A | CYS444 | |
E | CYS218 | |
E | CYS444 | |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | SITE: Important for electron transfer => ECO:0000250 |
Chain | Residue | Details |
A | TYR737 | |
A | TYR738 | |
E | TYR737 | |
E | TYR738 | |
Chain | Residue | Details |
A | LYS376 | |
E | LYS376 | |