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6L37

X-ray structure of human PPARalpha ligand binding domain-GW9662-ciprofibrate co-crystals obtained by delipidation and co-crystallization

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue GW9 A 501
ChainResidue
AILE241
ACYS276
ATHR279
ALEU331
AVAL332
AILE339
AGW9502

site_idAC2
Number of Residues8
Detailsbinding site for residue GW9 A 502
ChainResidue
ATHR253
ALEU254
ACYS275
AALA333
ATYR334
AGW9501
AALA250
AGLU251

site_idAC3
Number of Residues9
Detailsbinding site for residue GW9 A 503
ChainResidue
ALEU254
ALYS257
ALEU258
AASN261
AHIS274
ACYS275
ACYS278
AALA455
AHIS457

site_idAC4
Number of Residues10
Detailsbinding site for residue C5F A 504
ChainResidue
APHE273
ACYS276
AGLN277
ASER280
ATYR314
AHIS440
AILE447
AALA454
ALEU456
ATYR464

site_idAC5
Number of Residues10
Detailsbinding site for residue C5F B 504
ChainResidue
BPHE273
BCYS276
BGLN277
BSER280
BTYR314
BPHE318
BHIS440
BILE447
BALA455
BTYR464

site_idAC6
Number of Residues13
Detailsbinding site for Di-peptide GW9 B 501 and CYS B 276
ChainResidue
APHE421
BILE241
BILE272
BHIS274
BCYS275
BGLN277
BCYS278
BTHR279
BSER280
BLEU321
BVAL332
BGW9502
BC5F504

site_idAC7
Number of Residues16
Detailsbinding site for Di-peptide GW9 B 502 and CYS B 275
ChainResidue
APHE421
BALA250
BGLU251
BLEU254
BARG271
BILE272
BPHE273
BHIS274
BCYS276
BGLN277
BCYS278
BTHR279
BALA333
BTYR334
BGW9501
BGW9503

site_idAC8
Number of Residues15
Detailsbinding site for Di-peptide GW9 B 503 and CYS B 278
ChainResidue
BLEU254
BLYS257
BLEU258
BASN261
BHIS274
BCYS275
BCYS276
BGLN277
BTHR279
BSER280
BVAL281
BGLU282
BALA455
BLEU456
BHIS457

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues454
DetailsDomain: {"description":"NR LBD","evidences":[{"source":"PROSITE-ProRule","id":"PRU01189","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues258
DetailsRegion: {"description":"Required for heterodimerization with RXRA"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"19116277","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3ET1","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsSite: {"description":"Essential for heterodimerization with RXRA"}
ChainResidueDetails

249697

PDB entries from 2026-02-25

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