6L0F
Crystal structure of dihydroorotase in complex with 5-Aminouracil from Saccharomyces cerevisiae
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004151 | molecular_function | dihydroorotase activity |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
| A | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016812 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides |
| A | 0019856 | biological_process | pyrimidine nucleobase biosynthetic process |
| A | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0004151 | molecular_function | dihydroorotase activity |
| B | 0005634 | cellular_component | nucleus |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
| B | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016812 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides |
| B | 0019856 | biological_process | pyrimidine nucleobase biosynthetic process |
| B | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0004151 | molecular_function | dihydroorotase activity |
| C | 0005634 | cellular_component | nucleus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
| C | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
| C | 0008270 | molecular_function | zinc ion binding |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0016812 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides |
| C | 0019856 | biological_process | pyrimidine nucleobase biosynthetic process |
| C | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0004151 | molecular_function | dihydroorotase activity |
| D | 0005634 | cellular_component | nucleus |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
| D | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
| D | 0008270 | molecular_function | zinc ion binding |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0016812 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides |
| D | 0019856 | biological_process | pyrimidine nucleobase biosynthetic process |
| D | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 13 |
| Details | binding site for residue WBU A 401 |
| Chain | Residue |
| A | HIS16 |
| A | HIS262 |
| A | ALA275 |
| A | ZN402 |
| A | ZN403 |
| A | ARG18 |
| A | ASN43 |
| A | KCX98 |
| A | THR105 |
| A | THR106 |
| A | HIS137 |
| A | ASP258 |
| A | ALA260 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 402 |
| Chain | Residue |
| A | HIS14 |
| A | HIS16 |
| A | KCX98 |
| A | ASP258 |
| A | WBU401 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue ZN A 403 |
| Chain | Residue |
| A | KCX98 |
| A | HIS137 |
| A | HIS180 |
| A | LYS230 |
| A | WBU401 |
| site_id | AC4 |
| Number of Residues | 12 |
| Details | binding site for residue WBU B 401 |
| Chain | Residue |
| B | HIS16 |
| B | ARG18 |
| B | ASN43 |
| B | KCX98 |
| B | THR105 |
| B | THR106 |
| B | ASP258 |
| B | ALA260 |
| B | HIS262 |
| B | ALA275 |
| B | ZN402 |
| B | ZN403 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue ZN B 402 |
| Chain | Residue |
| B | HIS14 |
| B | HIS16 |
| B | KCX98 |
| B | ASP258 |
| B | WBU401 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue ZN B 403 |
| Chain | Residue |
| B | KCX98 |
| B | HIS137 |
| B | HIS180 |
| B | WBU401 |
| site_id | AC7 |
| Number of Residues | 13 |
| Details | binding site for residue WBU C 401 |
| Chain | Residue |
| C | HIS16 |
| C | ARG18 |
| C | ASN43 |
| C | KCX98 |
| C | THR105 |
| C | THR106 |
| C | LYS230 |
| C | ASP258 |
| C | ALA260 |
| C | HIS262 |
| C | ALA275 |
| C | ZN402 |
| C | ZN403 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue ZN C 402 |
| Chain | Residue |
| C | HIS14 |
| C | HIS16 |
| C | KCX98 |
| C | ASP258 |
| C | WBU401 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | binding site for residue ZN C 403 |
| Chain | Residue |
| C | KCX98 |
| C | HIS137 |
| C | HIS180 |
| C | WBU401 |
| site_id | AD1 |
| Number of Residues | 11 |
| Details | binding site for residue WBU D 401 |
| Chain | Residue |
| D | HIS16 |
| D | ARG18 |
| D | ASN43 |
| D | KCX98 |
| D | THR105 |
| D | THR106 |
| D | ASP258 |
| D | HIS262 |
| D | ALA275 |
| D | ZN402 |
| D | ZN403 |
| site_id | AD2 |
| Number of Residues | 4 |
| Details | binding site for residue ZN D 402 |
| Chain | Residue |
| D | KCX98 |
| D | HIS137 |
| D | HIS180 |
| D | WBU401 |
| site_id | AD3 |
| Number of Residues | 5 |
| Details | binding site for residue ZN D 403 |
| Chain | Residue |
| D | HIS14 |
| D | HIS16 |
| D | KCX98 |
| D | ASP258 |
| D | WBU401 |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 20 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P05020","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Binding site: {"description":"via carbamate group","evidences":[{"source":"UniProtKB","id":"P05020","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-carboxylysine","evidences":[{"source":"UniProtKB","id":"P05020","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






