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6KTC

Crystal structure of YBX1 CSD with m5C RNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
Functional Information from PROSITE/UniProt
site_idPS00352
Number of Residues20
DetailsCSD_1 Cold-shock (CSD) domain signature. YGFInrndtkeDVFvHqTaI
ChainResidueDetails
ATYR22-ILE41

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Important for C5-methylcytosine-recognition => ECO:0000269|PubMed:31358969
ChainResidueDetails
ATRP15

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKB/AKT1 => ECO:0000269|PubMed:15806160, ECO:0007744|PubMed:19690332
ChainResidueDetails
ASER52

237735

PDB entries from 2025-06-18

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