6KR3
Crystal structure of Dengue virus nonstructural protein NS5 (form 2)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
A | 0004482 | molecular_function | mRNA 5'-cap (guanine-N7-)-methyltransferase activity |
A | 0004483 | molecular_function | mRNA (nucleoside-2'-O-)-methyltransferase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0008168 | molecular_function | methyltransferase activity |
A | 0032259 | biological_process | methylation |
A | 0039694 | biological_process | viral RNA genome replication |
B | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
B | 0004482 | molecular_function | mRNA 5'-cap (guanine-N7-)-methyltransferase activity |
B | 0004483 | molecular_function | mRNA (nucleoside-2'-O-)-methyltransferase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0008168 | molecular_function | methyltransferase activity |
B | 0032259 | biological_process | methylation |
B | 0039694 | biological_process | viral RNA genome replication |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 1 |
Details | binding site for residue IOD A 1004 |
Chain | Residue |
B | ARG326 |
site_id | AC2 |
Number of Residues | 1 |
Details | binding site for residue IOD A 1006 |
Chain | Residue |
A | VAL723 |
site_id | AC3 |
Number of Residues | 1 |
Details | binding site for residue IOD A 1007 |
Chain | Residue |
A | LEU571 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue IOD A 1009 |
Chain | Residue |
A | ASN777 |
A | PRO884 |
site_id | AC5 |
Number of Residues | 1 |
Details | binding site for residue IOD A 1011 |
Chain | Residue |
A | SER189 |
site_id | AC6 |
Number of Residues | 1 |
Details | binding site for residue IOD A 1012 |
Chain | Residue |
A | ARG737 |
site_id | AC7 |
Number of Residues | 16 |
Details | binding site for residue SAH A 1013 |
Chain | Residue |
A | GLY81 |
A | CYS82 |
A | GLY83 |
A | GLY86 |
A | TRP87 |
A | THR104 |
A | LYS105 |
A | HIS110 |
A | GLU111 |
A | VAL130 |
A | ASP131 |
A | VAL132 |
A | PHE133 |
A | ASP146 |
A | SER56 |
A | GLY58 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue SAH A 1014 |
Chain | Residue |
A | ARG68 |
A | LEU70 |
A | ASN223 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue ZN A 1015 |
Chain | Residue |
A | GLU438 |
A | HIS442 |
A | CYS447 |
A | CYS450 |
site_id | AD1 |
Number of Residues | 4 |
Details | binding site for residue ZN A 1016 |
Chain | Residue |
A | HIS712 |
A | HIS714 |
A | CYS728 |
A | CYS847 |
site_id | AD2 |
Number of Residues | 4 |
Details | binding site for residue GOL A 1017 |
Chain | Residue |
A | LYS12 |
A | ARG16 |
A | ARG237 |
A | ILE240 |
site_id | AD3 |
Number of Residues | 3 |
Details | binding site for residue GOL A 1018 |
Chain | Residue |
A | PRO115 |
A | VAL124 |
A | LEU126 |
site_id | AD4 |
Number of Residues | 1 |
Details | binding site for residue IOD B 1003 |
Chain | Residue |
B | ASP663 |
site_id | AD5 |
Number of Residues | 3 |
Details | binding site for residue SAH B 1004 |
Chain | Residue |
B | ARG68 |
B | LEU70 |
B | HOH1109 |
site_id | AD6 |
Number of Residues | 14 |
Details | binding site for residue SAH B 1005 |
Chain | Residue |
B | SER56 |
B | GLY81 |
B | CYS82 |
B | GLY86 |
B | TRP87 |
B | THR104 |
B | LYS105 |
B | HIS110 |
B | VAL130 |
B | ASP131 |
B | VAL132 |
B | PHE133 |
B | ASP146 |
B | ILE147 |
site_id | AD7 |
Number of Residues | 4 |
Details | binding site for residue ZN B 1006 |
Chain | Residue |
B | GLU438 |
B | HIS442 |
B | CYS447 |
B | CYS450 |
site_id | AD8 |
Number of Residues | 4 |
Details | binding site for residue ZN B 1007 |
Chain | Residue |
B | HIS712 |
B | HIS714 |
B | CYS728 |
B | CYS847 |
site_id | AD9 |
Number of Residues | 8 |
Details | binding site for residue GOL B 1008 |
Chain | Residue |
A | ASP333 |
A | ILE334 |
A | PRO336 |
A | THR339 |
B | ASP333 |
B | ILE334 |
B | PRO336 |
B | THR339 |
site_id | AE1 |
Number of Residues | 5 |
Details | binding site for residue GOL B 1009 |
Chain | Residue |
A | LYS330 |
A | PRO331 |
A | TRP859 |
B | MET343 |
B | HOH1102 |
site_id | AE2 |
Number of Residues | 3 |
Details | binding site for residue GOL B 1010 |
Chain | Residue |
B | LYS330 |
B | SER855 |
B | TRP859 |