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6KO7

Crystal structure of the Ethidium bound RamR determined with XtaLAB Synergy

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0003723molecular_functionRNA binding
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0003700molecular_functionDNA-binding transcription factor activity
B0003723molecular_functionRNA binding
B0006355biological_processregulation of DNA-templated transcription
C0003677molecular_functionDNA binding
C0003700molecular_functionDNA-binding transcription factor activity
C0003723molecular_functionRNA binding
C0006355biological_processregulation of DNA-templated transcription
D0003677molecular_functionDNA binding
D0003700molecular_functionDNA-binding transcription factor activity
D0003723molecular_functionRNA binding
D0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue ET A 301
ChainResidue
ATHR85
AILE88
ATRP89
ACYS134
AASP152
APHE155
AMET184

site_idAC2
Number of Residues8
Detailsbinding site for residue SO4 A 302
ChainResidue
APRO100
AALA101
AARG102
AHOH402
AHOH443
AHOH473
AGLN19
AHIS99

site_idAC3
Number of Residues8
Detailsbinding site for residue ET B 301
ChainResidue
BTHR85
BILE88
BTRP89
BCYS134
BASP152
BPHE155
BMET184
BLEU188

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 B 302
ChainResidue
BGLN19
BHIS99
BPRO100
BALA101
BARG102

site_idAC5
Number of Residues8
Detailsbinding site for residue ET C 301
ChainResidue
CTHR85
CILE88
CTRP89
CCYS134
CASP152
CPHE155
CMET184
CTHR189

site_idAC6
Number of Residues7
Detailsbinding site for residue SO4 C 302
ChainResidue
CGLN19
CHIS99
CPRO100
CALA101
CARG102
CHOH428
CHOH443

site_idAC7
Number of Residues8
Detailsbinding site for residue ET D 301
ChainResidue
DTHR85
DILE88
DTRP89
DCYS134
DASP152
DPHE155
DMET184
DTRP185

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 D 302
ChainResidue
DGLN19
DHIS99
DPRO100
DALA101
DARG102
DHOH432

Functional Information from PROSITE/UniProt
site_idPS01081
Number of Residues31
DetailsHTH_TETR_1 TetR-type HTH domain signature. GIaa.STavIarnagVAeGtLFrYFaTKdelI
ChainResidueDetails
AGLY25-ILE55

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues76
DetailsDNA binding: {"description":"H-T-H motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU00335","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues59
DetailsDomain: {"description":"HTH tetR-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00335","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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