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6K8K

Crystal structure of Arabidopsis thaliana BIC2-CRY2 complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000325cellular_componentplant-type vacuole
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006139biological_processnucleobase-containing compound metabolic process
A0006325biological_processchromatin organization
A0006338biological_processchromatin remodeling
A0006950biological_processresponse to stress
A0006952biological_processdefense response
A0007623biological_processcircadian rhythm
A0009414biological_processresponse to water deprivation
A0009416biological_processresponse to light stimulus
A0009637biological_processresponse to blue light
A0009638biological_processphototropism
A0009646biological_processresponse to absence of light
A0009785biological_processblue light signaling pathway
A0009881molecular_functionphotoreceptor activity
A0009882molecular_functionblue light photoreceptor activity
A0009909biological_processregulation of flower development
A0009911biological_processpositive regulation of flower development
A0010075biological_processregulation of meristem growth
A0010118biological_processstomatal movement
A0010244biological_processresponse to low fluence blue light stimulus by blue low-fluence system
A0010617biological_processcircadian regulation of calcium ion oscillation
A0016301molecular_functionkinase activity
A0016604cellular_componentnuclear body
A0016605cellular_componentPML body
A0042752biological_processregulation of circadian rhythm
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0046777biological_processprotein autophosphorylation
A0046872molecular_functionmetal ion binding
A0048574biological_processlong-day photoperiodism, flowering
A0051607biological_processdefense response to virus
A0071949molecular_functionFAD binding
A0072387biological_processflavin adenine dinucleotide metabolic process
A0097159molecular_functionorganic cyclic compound binding
A1901371biological_processregulation of leaf morphogenesis
A1902347biological_processresponse to strigolactone
A2000028biological_processregulation of photoperiodism, flowering
A2000379biological_processpositive regulation of reactive oxygen species metabolic process
B0000325cellular_componentplant-type vacuole
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0006139biological_processnucleobase-containing compound metabolic process
B0006325biological_processchromatin organization
B0006338biological_processchromatin remodeling
B0006950biological_processresponse to stress
B0006952biological_processdefense response
B0007623biological_processcircadian rhythm
B0009414biological_processresponse to water deprivation
B0009416biological_processresponse to light stimulus
B0009637biological_processresponse to blue light
B0009638biological_processphototropism
B0009646biological_processresponse to absence of light
B0009785biological_processblue light signaling pathway
B0009881molecular_functionphotoreceptor activity
B0009882molecular_functionblue light photoreceptor activity
B0009909biological_processregulation of flower development
B0009911biological_processpositive regulation of flower development
B0010075biological_processregulation of meristem growth
B0010118biological_processstomatal movement
B0010244biological_processresponse to low fluence blue light stimulus by blue low-fluence system
B0010617biological_processcircadian regulation of calcium ion oscillation
B0016301molecular_functionkinase activity
B0016604cellular_componentnuclear body
B0016605cellular_componentPML body
B0042752biological_processregulation of circadian rhythm
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0046777biological_processprotein autophosphorylation
B0046872molecular_functionmetal ion binding
B0048574biological_processlong-day photoperiodism, flowering
B0051607biological_processdefense response to virus
B0071949molecular_functionFAD binding
B0072387biological_processflavin adenine dinucleotide metabolic process
B0097159molecular_functionorganic cyclic compound binding
B1901371biological_processregulation of leaf morphogenesis
B1902347biological_processresponse to strigolactone
B2000028biological_processregulation of photoperiodism, flowering
B2000379biological_processpositive regulation of reactive oxygen species metabolic process
C0009785biological_processblue light signaling pathway
D0000325cellular_componentplant-type vacuole
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0005634cellular_componentnucleus
D0005737cellular_componentcytoplasm
D0006139biological_processnucleobase-containing compound metabolic process
D0006325biological_processchromatin organization
D0006338biological_processchromatin remodeling
D0006950biological_processresponse to stress
D0006952biological_processdefense response
D0007623biological_processcircadian rhythm
D0009414biological_processresponse to water deprivation
D0009416biological_processresponse to light stimulus
D0009637biological_processresponse to blue light
D0009638biological_processphototropism
D0009646biological_processresponse to absence of light
D0009785biological_processblue light signaling pathway
D0009881molecular_functionphotoreceptor activity
D0009882molecular_functionblue light photoreceptor activity
D0009909biological_processregulation of flower development
D0009911biological_processpositive regulation of flower development
D0010075biological_processregulation of meristem growth
D0010118biological_processstomatal movement
D0010244biological_processresponse to low fluence blue light stimulus by blue low-fluence system
D0010617biological_processcircadian regulation of calcium ion oscillation
D0016301molecular_functionkinase activity
D0016604cellular_componentnuclear body
D0016605cellular_componentPML body
D0042752biological_processregulation of circadian rhythm
D0042802molecular_functionidentical protein binding
D0042803molecular_functionprotein homodimerization activity
D0046777biological_processprotein autophosphorylation
D0046872molecular_functionmetal ion binding
D0048574biological_processlong-day photoperiodism, flowering
D0051607biological_processdefense response to virus
D0071949molecular_functionFAD binding
D0072387biological_processflavin adenine dinucleotide metabolic process
D0097159molecular_functionorganic cyclic compound binding
D1901371biological_processregulation of leaf morphogenesis
D1902347biological_processresponse to strigolactone
D2000028biological_processregulation of photoperiodism, flowering
D2000379biological_processpositive regulation of reactive oxygen species metabolic process
E0009785biological_processblue light signaling pathway
F0009785biological_processblue light signaling pathway
G0000325cellular_componentplant-type vacuole
G0005515molecular_functionprotein binding
G0005524molecular_functionATP binding
G0005634cellular_componentnucleus
G0005737cellular_componentcytoplasm
G0006139biological_processnucleobase-containing compound metabolic process
G0006325biological_processchromatin organization
G0006338biological_processchromatin remodeling
G0006950biological_processresponse to stress
G0006952biological_processdefense response
G0007623biological_processcircadian rhythm
G0009414biological_processresponse to water deprivation
G0009416biological_processresponse to light stimulus
G0009637biological_processresponse to blue light
G0009638biological_processphototropism
G0009646biological_processresponse to absence of light
G0009785biological_processblue light signaling pathway
G0009881molecular_functionphotoreceptor activity
G0009882molecular_functionblue light photoreceptor activity
G0009909biological_processregulation of flower development
G0009911biological_processpositive regulation of flower development
G0010075biological_processregulation of meristem growth
G0010118biological_processstomatal movement
G0010244biological_processresponse to low fluence blue light stimulus by blue low-fluence system
G0010617biological_processcircadian regulation of calcium ion oscillation
G0016301molecular_functionkinase activity
G0016604cellular_componentnuclear body
G0016605cellular_componentPML body
G0042752biological_processregulation of circadian rhythm
G0042802molecular_functionidentical protein binding
G0042803molecular_functionprotein homodimerization activity
G0046777biological_processprotein autophosphorylation
G0046872molecular_functionmetal ion binding
G0048574biological_processlong-day photoperiodism, flowering
G0051607biological_processdefense response to virus
G0071949molecular_functionFAD binding
G0072387biological_processflavin adenine dinucleotide metabolic process
G0097159molecular_functionorganic cyclic compound binding
G1901371biological_processregulation of leaf morphogenesis
G1902347biological_processresponse to strigolactone
G2000028biological_processregulation of photoperiodism, flowering
G2000379biological_processpositive regulation of reactive oxygen species metabolic process
H0009785biological_processblue light signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues23
Detailsbinding site for residue FAD A 701
ChainResidue
ATYR232
ALEU293
AARG294
ATRP353
AASN356
AARG359
AVAL360
AASP387
AALA388
AASP389
ACYS392
ATHR244
AASP393
AGLY396
AMG703
AHOH815
ASER245
ALEU246
ALEU247
ASER248
ALEU251
AGLY290
AILE291

site_idAC2
Number of Residues6
Detailsbinding site for residue AMP A 702
ChainResidue
APHE151
AASN356
AARG357
AVAL360
ALEU395
ATYR399

site_idAC3
Number of Residues3
Detailsbinding site for residue MG A 703
ChainResidue
ATHR244
AASN356
AFAD701

site_idAC4
Number of Residues24
Detailsbinding site for residue FAD B 701
ChainResidue
BTYR232
BTHR244
BSER245
BLEU246
BLEU247
BSER248
BLEU251
BPHE287
BGLY290
BILE291
BLEU293
BARG294
BTRP353
BMET354
BASN356
BARG359
BVAL360
BASP387
BALA388
BASP389
BCYS392
BASP393
BGLY396
BAMP702

site_idAC5
Number of Residues9
Detailsbinding site for residue AMP B 702
ChainResidue
BPHE151
BLEU293
BASN356
BARG357
BVAL360
BLEU395
BTYR399
BILE404
BFAD701

site_idAC6
Number of Residues26
Detailsbinding site for residue FAD D 701
ChainResidue
DTYR232
DTHR244
DSER245
DLEU246
DLEU247
DSER248
DLEU251
DPHE287
DGLY290
DILE291
DLEU293
DARG294
DTRP353
DMET354
DASN356
DARG359
DVAL360
DSER363
DASP387
DALA388
DASP389
DCYS392
DASP393
DGLY396
DHOH814
DHOH837

site_idAC7
Number of Residues11
Detailsbinding site for residue AMP D 702
ChainResidue
DILE404
DASP406
DMG704
DPHE151
DARG289
DLEU293
DASN356
DARG357
DVAL360
DLEU395
DTYR399

site_idAC8
Number of Residues3
Detailsbinding site for residue MG D 703
ChainResidue
DGLU347
DTHR351
FARG48

site_idAC9
Number of Residues3
Detailsbinding site for residue MG D 704
ChainResidue
DTYR399
DHIS408
DAMP702

site_idAD1
Number of Residues25
Detailsbinding site for residue FAD G 701
ChainResidue
GTYR232
GTHR244
GSER245
GLEU246
GLEU247
GSER248
GLEU251
GPHE287
GGLY290
GILE291
GLEU293
GARG294
GTRP353
GMET354
GASN356
GARG359
GVAL360
GASP387
GALA388
GASP389
GCYS392
GASP393
GGLY396
GAMP702
GMG703

site_idAD2
Number of Residues11
Detailsbinding site for residue AMP G 702
ChainResidue
GPHE151
GLYS237
GLEU293
GASN356
GARG357
GVAL360
GLEU395
GTYR399
GILE404
GFAD701
GHOH807

site_idAD3
Number of Residues4
Detailsbinding site for residue MG G 703
ChainResidue
GTHR244
GHIS355
GASN356
GFAD701

Functional Information from PROSITE/UniProt
site_idPS00394
Number of Residues13
DetailsDNA_PHOTOLYASES_1_1 DNA photolyases class 1 signature 1. TGyPLVDAgMReL
ChainResidueDetails
ATHR336-LEU348

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:32398826, ECO:0007744|PDB:6K8I, ECO:0007744|PDB:6K8K
ChainResidueDetails
ATYR232
DTHR244
DASN356
DASP387
GTYR232
GTHR244
GASN356
GASP387
ATHR244
AASN356
AASP387
BTYR232
BTHR244
BASN356
BASP387
DTYR232

site_idSWS_FT_FI2
Number of Residues16
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q43125
ChainResidueDetails
AASN235
DSER243
DHIS355
DASP406
GASN235
GSER243
GHIS355
GASP406
ASER243
AHIS355
AASP406
BASN235
BSER243
BHIS355
BASP406
DASN235

site_idSWS_FT_FI3
Number of Residues12
DetailsSITE: Involved in electron transfer from the protein surface to the FAD cofactor => ECO:0000269|PubMed:25428980
ChainResidueDetails
ATRP321
GTRP321
GTRP374
GTRP397
ATRP374
ATRP397
BTRP321
BTRP374
BTRP397
DTRP321
DTRP374
DTRP397

site_idSWS_FT_FI4
Number of Residues4
DetailsMOD_RES: Phosphoserine; by CK1 => ECO:0000269|PubMed:23897926
ChainResidueDetails
ASER587
BSER587
DSER587
GSER587

site_idSWS_FT_FI5
Number of Residues12
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:25792146
ChainResidueDetails
ASER598
GSER598
GSER599
GSER605
ASER599
ASER605
BSER598
BSER599
BSER605
DSER598
DSER599
DSER605

site_idSWS_FT_FI6
Number of Residues4
DetailsMOD_RES: Phosphothreonine; by CK1 => ECO:0000269|PubMed:23897926
ChainResidueDetails
ATHR603
BTHR603
DTHR603
GTHR603

219140

PDB entries from 2024-05-01

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