6K5K
Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0004850 | molecular_function | uridine phosphorylase activity |
| A | 0005829 | cellular_component | cytosol |
| A | 0006218 | biological_process | uridine catabolic process |
| A | 0009116 | biological_process | nucleoside metabolic process |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016757 | molecular_function | glycosyltransferase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0004850 | molecular_function | uridine phosphorylase activity |
| B | 0005829 | cellular_component | cytosol |
| B | 0006218 | biological_process | uridine catabolic process |
| B | 0009116 | biological_process | nucleoside metabolic process |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016757 | molecular_function | glycosyltransferase activity |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0004850 | molecular_function | uridine phosphorylase activity |
| C | 0005829 | cellular_component | cytosol |
| C | 0006218 | biological_process | uridine catabolic process |
| C | 0009116 | biological_process | nucleoside metabolic process |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016757 | molecular_function | glycosyltransferase activity |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0004850 | molecular_function | uridine phosphorylase activity |
| D | 0005829 | cellular_component | cytosol |
| D | 0006218 | biological_process | uridine catabolic process |
| D | 0009116 | biological_process | nucleoside metabolic process |
| D | 0016740 | molecular_function | transferase activity |
| D | 0016757 | molecular_function | glycosyltransferase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 A 401 |
| Chain | Residue |
| A | GLY35 |
| A | ARG104 |
| A | GLY106 |
| A | THR107 |
| A | DUR402 |
| A | HOH555 |
| C | ARG59 |
| site_id | AC2 |
| Number of Residues | 16 |
| Details | binding site for residue DUR A 402 |
| Chain | Residue |
| A | CYS108 |
| A | GLY109 |
| A | PHE202 |
| A | GLN206 |
| A | ARG208 |
| A | VAL234 |
| A | GLU235 |
| A | MET236 |
| A | VAL261 |
| A | PO4401 |
| A | HOH525 |
| A | HOH555 |
| C | HIS19 |
| C | ARG59 |
| A | MET80 |
| A | THR107 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue PO4 B 401 |
| Chain | Residue |
| B | GLY35 |
| B | ARG104 |
| B | THR107 |
| B | DUR402 |
| B | HOH549 |
| D | ARG59 |
| site_id | AC4 |
| Number of Residues | 13 |
| Details | binding site for residue DUR B 402 |
| Chain | Residue |
| B | MET80 |
| B | THR107 |
| B | CYS108 |
| B | GLY109 |
| B | GLN206 |
| B | ARG208 |
| B | VAL234 |
| B | GLU235 |
| B | MET236 |
| B | PO4401 |
| B | HOH549 |
| D | HIS19 |
| D | ARG59 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 C 401 |
| Chain | Residue |
| A | ARG59 |
| C | GLY35 |
| C | ARG104 |
| C | GLY106 |
| C | THR107 |
| C | DUR402 |
| C | HOH512 |
| site_id | AC6 |
| Number of Residues | 15 |
| Details | binding site for residue DUR C 402 |
| Chain | Residue |
| A | HIS19 |
| A | ARG59 |
| C | MET80 |
| C | THR107 |
| C | GLY109 |
| C | PHE202 |
| C | GLN206 |
| C | ARG208 |
| C | VAL234 |
| C | GLU235 |
| C | MET236 |
| C | GLU237 |
| C | PO4401 |
| C | HOH512 |
| C | HOH558 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 D 401 |
| Chain | Residue |
| B | ARG59 |
| D | GLY35 |
| D | ARG104 |
| D | GLY106 |
| D | THR107 |
| D | DUR402 |
| D | HOH513 |
| site_id | AC8 |
| Number of Residues | 14 |
| Details | binding site for residue DUR D 402 |
| Chain | Residue |
| B | HIS19 |
| B | ARG59 |
| D | MET80 |
| D | THR107 |
| D | GLY109 |
| D | GLN206 |
| D | ARG208 |
| D | VAL234 |
| D | GLU235 |
| D | MET236 |
| D | GLU237 |
| D | PO4401 |
| D | HOH513 |
| D | HOH544 |
