Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JP4

Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila

Functional Information from GO Data
ChainGOidnamespacecontents
A0016829molecular_functionlyase activity
B0016829molecular_functionlyase activity
C0016829molecular_functionlyase activity
D0016829molecular_functionlyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 801
ChainResidue
AHIS407
AASP425
AHIS448
AHOH926
AHOH940
AHOH984

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 802
ChainResidue
AHOH1016
AHOH1245
AHOH1292
AGLU133
ATRP180
AHOH920

site_idAC3
Number of Residues6
Detailsbinding site for residue CA A 803
ChainResidue
AGLU287
AGLU401
AHIS407
AASP409
AHOH991
AHOH1120

site_idAC4
Number of Residues6
Detailsbinding site for residue CA A 804
ChainResidue
AASP474
ATHR475
AASP479
AGLN513
AHOH1049
AHOH1163

site_idAC5
Number of Residues6
Detailsbinding site for residue ACT A 805
ChainResidue
AHIS238
ATYR239
ATYR242
AGLY340
AHOH907
AHOH1162

site_idAC6
Number of Residues4
Detailsbinding site for residue ACT A 806
ChainResidue
ASER501
ASER524
AHOH1210
AHOH1247

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO A 807
ChainResidue
ATYR6
AASP7
AASN464
ATHR465
ATHR466

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 808
ChainResidue
AGLU4
AEDO809
AHOH952
BGLU579

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 809
ChainResidue
AGLU4
AEDO808
AHOH952

site_idAD1
Number of Residues1
Detailsbinding site for residue EDO A 810
ChainResidue
AASP204

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 811
ChainResidue
ATYR547
ATRP566
AHOH1212

site_idAD3
Number of Residues7
Detailsbinding site for residue CAC A 812
ChainResidue
AGLU572
AGLN599
AILE600
AALA601
AHOH960
AHOH998
AHOH1177

site_idAD4
Number of Residues6
Detailsbinding site for residue MN B 801
ChainResidue
BHIS407
BASP425
BHIS448
BHOH915
BHOH920
BHOH923

site_idAD5
Number of Residues5
Detailsbinding site for residue MG B 802
ChainResidue
BGLU133
BTRP180
BHOH933
BHOH976
BHOH1104

site_idAD6
Number of Residues6
Detailsbinding site for residue CA B 803
ChainResidue
BGLU287
BGLU401
BHIS407
BASP409
BHOH907
BHOH1036

site_idAD7
Number of Residues4
Detailsbinding site for residue CA B 804
ChainResidue
BASP474
BTHR475
BASP479
BGLN513

site_idAD8
Number of Residues4
Detailsbinding site for residue ACT B 805
ChainResidue
BHIS238
BTYR239
BGLY340
BHOH1124

site_idAD9
Number of Residues3
Detailsbinding site for residue ACT B 806
ChainResidue
BHIS78
BTYR135
BHOH958

site_idAE1
Number of Residues4
Detailsbinding site for residue EDO B 807
ChainResidue
AASN454
BILE576
BARG598
BHOH934

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO B 808
ChainResidue
BTYR6
BASP7
BASN464
BTHR465
BTHR466

site_idAE3
Number of Residues6
Detailsbinding site for residue EDO B 809
ChainResidue
BHOH1139
BHIS185
BHIS187
BASN404
BTYR433
BHOH943

site_idAE4
Number of Residues6
Detailsbinding site for residue MN C 801
ChainResidue
CHIS407
CASP425
CHIS448
CHOH901
CHOH903
CHOH905

site_idAE5
Number of Residues3
Detailsbinding site for residue MG C 802
ChainResidue
CGLU133
CTRP180
CHOH915

site_idAE6
Number of Residues4
Detailsbinding site for residue CA C 803
ChainResidue
CGLU287
CGLU401
CHIS407
CASP409

site_idAE7
Number of Residues6
Detailsbinding site for residue CA C 804
ChainResidue
CASP474
CTHR475
CASP479
CGLN513
CHOH930
CHOH946

site_idAE8
Number of Residues3
Detailsbinding site for residue ACT C 805
ChainResidue
CHIS238
CTYR239
CGLY340

site_idAE9
Number of Residues2
Detailsbinding site for residue EDO C 806
ChainResidue
ATYR153
CGLU746

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon