6JP4
Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-23 |
Detector | ADSC QUANTUM 1 |
Wavelength(s) | 0.97179 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 261.324, 394.812, 112.187 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 98.898 - 2.069 |
Rwork | 0.222 |
R-free | 0.24020 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.515 |
Data reduction software | Aimless |
Data scaling software | pointless |
Phasing software | SHELX |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 98.898 | 2.110 |
High resolution limit [Å] | 2.069 | 2.069 |
Number of reflections | 348350 | 16738 |
<I/σ(I)> | 11 | 1.1 |
Completeness [%] | 99.5 | |
Redundancy | 7.3 | |
CC(1/2) | 0.992 | 0.541 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 298 | 15% PEG 6000, 0.1 M magnesium acetate |