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6JNK

Crystal structure of Azospirillum brasilense L-arabinose 1-dehydrogenase (NADP-bound form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0019151molecular_functiongalactose 1-dehydrogenase activity
A0019568biological_processarabinose catabolic process
A0019570biological_processL-arabinose catabolic process to 2-oxoglutarate
A0019572biological_processL-arabinose catabolic process
A0044103molecular_functionL-arabinose 1-dehydrogenase (NADP+) activity
A0047910molecular_functiongalactose 1-dehydrogenase (NADP+) activity
A0050022molecular_functionL-arabinose 1-dehydrogenase (NAD+) activity
A0070401molecular_functionNADP+ binding
A0070403molecular_functionNAD+ binding
B0000166molecular_functionnucleotide binding
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0019151molecular_functiongalactose 1-dehydrogenase activity
B0019568biological_processarabinose catabolic process
B0019570biological_processL-arabinose catabolic process to 2-oxoglutarate
B0019572biological_processL-arabinose catabolic process
B0044103molecular_functionL-arabinose 1-dehydrogenase (NADP+) activity
B0047910molecular_functiongalactose 1-dehydrogenase (NADP+) activity
B0050022molecular_functionL-arabinose 1-dehydrogenase (NAD+) activity
B0070401molecular_functionNADP+ binding
B0070403molecular_functionNAD+ binding
C0000166molecular_functionnucleotide binding
C0016491molecular_functionoxidoreductase activity
C0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
C0019151molecular_functiongalactose 1-dehydrogenase activity
C0019568biological_processarabinose catabolic process
C0019570biological_processL-arabinose catabolic process to 2-oxoglutarate
C0019572biological_processL-arabinose catabolic process
C0044103molecular_functionL-arabinose 1-dehydrogenase (NADP+) activity
C0047910molecular_functiongalactose 1-dehydrogenase (NADP+) activity
C0050022molecular_functionL-arabinose 1-dehydrogenase (NAD+) activity
C0070401molecular_functionNADP+ binding
C0070403molecular_functionNAD+ binding
D0000166molecular_functionnucleotide binding
D0016491molecular_functionoxidoreductase activity
D0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
D0019151molecular_functiongalactose 1-dehydrogenase activity
D0019568biological_processarabinose catabolic process
D0019570biological_processL-arabinose catabolic process to 2-oxoglutarate
D0019572biological_processL-arabinose catabolic process
D0044103molecular_functionL-arabinose 1-dehydrogenase (NADP+) activity
D0047910molecular_functiongalactose 1-dehydrogenase (NADP+) activity
D0050022molecular_functionL-arabinose 1-dehydrogenase (NAD+) activity
D0070401molecular_functionNADP+ binding
D0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues23
Detailsbinding site for residue NAP A 401
ChainResidue
AGLY13
AVAL72
AARG73
AGLU90
ALYS91
AHIS119
AHIS153
AGLN156
ATRP158
AASP169
ATYR266
ALYS14
AHOH530
AHOH544
AHOH549
AHOH599
AILE15
ASER37
AARG38
AHIS39
ACYS67
AALA68
APRO69

site_idAC2
Number of Residues27
Detailsbinding site for residue NAP B 401
ChainResidue
BGLY13
BLYS14
BILE15
BSER37
BARG38
BHIS39
BALA40
BCYS67
BALA68
BPRO69
BVAL72
BARG73
BGLU90
BLYS91
BHIS119
BGLN156
BTRP158
BASP169
BTYR266
BHOH519
BHOH525
BHOH529
BHOH541
BHOH555
BHOH569
BHOH579
BHOH595

site_idAC3
Number of Residues22
Detailsbinding site for residue NAP C 401
ChainResidue
CILE12
CGLY13
CLYS14
CILE15
CSER37
CARG38
CHIS39
CCYS67
CALA68
CPRO69
CVAL72
CARG73
CGLU90
CLYS91
CHIS119
CGLN156
CTRP158
CASP169
CTYR266
CHOH515
CHOH525
CHOH567

site_idAC4
Number of Residues26
Detailsbinding site for residue NAP D 401
ChainResidue
DGLY11
DGLY13
DLYS14
DILE15
DSER37
DARG38
DHIS39
DCYS67
DALA68
DPRO69
DVAL72
DARG73
DGLU90
DLYS91
DHIS119
DHIS153
DGLN156
DTRP158
DASP169
DTYR266
DHOH505
DHOH550
DHOH551
DHOH553
DHOH563
DHOH582

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton donor => ECO:0000250|UniProtKB:B3TMR8
ChainResidueDetails
ALYS91
BLYS91
CLYS91
DLYS91

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:B3TMR8
ChainResidueDetails
AILE15
ASER37
BILE15
BSER37
CILE15
CSER37
DILE15
DSER37

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:B3TMR8, ECO:0000305|PubMed:16326697
ChainResidueDetails
AASP169
BASP169
CASP169
DASP169

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PDB entries from 2024-10-16

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