6IZI
Crystal structure of E. coli peptide deformylase and methionine aminopeptidase fitted into the cryo-EM density map of the complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| P | 0005515 | molecular_function | protein binding |
| P | 0005829 | cellular_component | cytosol |
| P | 0006412 | biological_process | translation |
| P | 0008198 | molecular_function | ferrous iron binding |
| P | 0008270 | molecular_function | zinc ion binding |
| P | 0016787 | molecular_function | hydrolase activity |
| P | 0031365 | biological_process | N-terminal protein amino acid modification |
| P | 0042586 | molecular_function | peptide deformylase activity |
| P | 0043022 | molecular_function | ribosome binding |
| P | 0046872 | molecular_function | metal ion binding |
| Q | 0004177 | molecular_function | aminopeptidase activity |
| Q | 0004239 | molecular_function | initiator methionyl aminopeptidase activity |
| Q | 0005506 | molecular_function | iron ion binding |
| Q | 0005829 | cellular_component | cytosol |
| Q | 0006508 | biological_process | proteolysis |
| Q | 0008198 | molecular_function | ferrous iron binding |
| Q | 0008233 | molecular_function | peptidase activity |
| Q | 0016787 | molecular_function | hydrolase activity |
| Q | 0046872 | molecular_function | metal ion binding |
| Q | 0070006 | molecular_function | metalloaminopeptidase activity |
Functional Information from PROSITE/UniProt
| site_id | PS00680 |
| Number of Residues | 19 |
| Details | MAP_1 Methionine aminopeptidase subfamily 1 signature. YcGHGIGqgfHeepqVl.HY |
| Chain | Residue | Details |
| Q | TYR168-TYR186 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Active site: {"evidences":[{"source":"PubMed","id":"9846875","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"9846875","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01974","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"10555963","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16769889","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17120228","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 5 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01974","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"10387007","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"10555963","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16769889","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17120228","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18093325","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18785729","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"10555963","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16769889","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17120228","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
