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6IX7

The structure of LepI C52A in complex with SAH and substrate analogue

Functional Information from GO Data
ChainGOidnamespacecontents
A0008168molecular_functionmethyltransferase activity
A0008171molecular_functionO-methyltransferase activity
A0016740molecular_functiontransferase activity
A0032259biological_processmethylation
A0044550biological_processsecondary metabolite biosynthetic process
A0046983molecular_functionprotein dimerization activity
B0008168molecular_functionmethyltransferase activity
B0008171molecular_functionO-methyltransferase activity
B0016740molecular_functiontransferase activity
B0032259biological_processmethylation
B0044550biological_processsecondary metabolite biosynthetic process
B0046983molecular_functionprotein dimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue SAH A 401
ChainResidue
AGLY227
AARG291
AHOH531
AHOH554
AHOH601
AHOH642
AHOH656
AHOH685
AGLY229
AASP252
ALEU253
AVAL256
AHIS274
AASN275
APHE276
AHIS277

site_idAC2
Number of Residues14
Detailsbinding site for residue B0L A 402
ChainResidue
AHIS133
ALEU138
ACYS175
APHE189
AARG295
AASP296
ATHR338
ACYS341
AILE342
ALEU346
AGOL406
BPHE41
BVAL44
BMET45

site_idAC3
Number of Residues6
Detailsbinding site for residue CL A 403
ChainResidue
ATYR241
APRO242
AASN243
AGLN244
BTHR278
BPRO279

site_idAC4
Number of Residues6
Detailsbinding site for residue CL A 404
ChainResidue
ALYS329
AGLY330
AALA331
BARG97
BGLN107
BHOH648

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL A 405
ChainResidue
AALA24
AASP28
APRO376
AVAL377
AHOH710
AHOH728
BASP42

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 406
ChainResidue
AARG197
AARG295
ATHR338
AVAL377
AASN379
AB0L402
AHOH509
AHOH559

site_idAC7
Number of Residues2
Detailsbinding site for residue EDO A 407
ChainResidue
AHOH505
AHOH615

site_idAC8
Number of Residues18
Detailsbinding site for residue SAH B 401
ChainResidue
BLEU193
BGLY227
BGLY229
BASP252
BLEU253
BVAL256
BHIS274
BASN275
BPHE276
BHIS277
BARG291
BHOH515
BHOH575
BHOH584
BHOH586
BHOH673
BHOH687
BHOH695

site_idAC9
Number of Residues15
Detailsbinding site for residue B0L B 402
ChainResidue
AVAL44
AMET45
BLEU127
BHIS133
BLEU138
BCYS175
BPHE189
BARG295
BASP296
BTHR338
BCYS341
BILE342
BLEU346
BGOL405
BEDO408

site_idAD1
Number of Residues1
Detailsbinding site for residue CL B 403
ChainResidue
BHOH609

site_idAD2
Number of Residues1
Detailsbinding site for residue CL B 404
ChainResidue
BPHE205

site_idAD3
Number of Residues10
Detailsbinding site for residue GOL B 405
ChainResidue
BASN379
BB0L402
BEDO406
BHOH521
BHOH569
BARG197
BARG295
BALA334
BTHR338
BVAL377

site_idAD4
Number of Residues7
Detailsbinding site for residue EDO B 406
ChainResidue
BTHR374
BTRP375
BPRO376
BVAL377
BASN379
BGOL405
BEDO407

site_idAD5
Number of Residues4
Detailsbinding site for residue EDO B 407
ChainResidue
BASP28
BVAL377
BEDO406
BHOH662

site_idAD6
Number of Residues2
Detailsbinding site for residue EDO B 408
ChainResidue
BB0L402
BHOH623

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues40
DetailsRegion: {"description":"Substrate binding","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues26
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"O04385","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01020","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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