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6IWG

Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with N-myristoylated 4-mer lipopeptide derived from SIV nef protein

Functional Information from GO Data
ChainGOidnamespacecontents
B0006955biological_processimmune response
B0042612cellular_componentMHC class I protein complex
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue NA A 301
ChainResidue
AGLN262
AHIS263
ALEU266
AHOH472
AHOH563
BHOH294

site_idAC2
Number of Residues4
Detailsbinding site for residue NA A 302
ChainResidue
BGLU16
AGLU264
AEDO310
AHOH564

site_idAC3
Number of Residues2
Detailsbinding site for residue NA A 303
ChainResidue
AASP183
AEDO313

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 304
ChainResidue
ATYR7
ATYR159
ATRP167
ATYR171
AEDO307

site_idAC5
Number of Residues6
Detailsbinding site for residue EDO A 305
ChainResidue
AGLU161
ABO3314
BTHR86
BLEU87
BSER88
BHOH226

site_idAC6
Number of Residues9
Detailsbinding site for residue EDO A 306
ChainResidue
AASP122
ATYR123
AILE124
AALA125
AILE134
AALA135
AALA136
AHOH409
AHOH518

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO A 307
ChainResidue
ATYR7
AGLU63
AARG66
AEDO304

site_idAC8
Number of Residues3
Detailsbinding site for residue EDO A 308
ChainResidue
ASER88
AGLU89
APRO193

site_idAC9
Number of Residues8
Detailsbinding site for residue EDO A 309
ChainResidue
AASP30
APRO235
AGLY239
APHE241
AHOH421
AHOH429
AHOH468
AHOH523

site_idAD1
Number of Residues7
Detailsbinding site for residue EDO A 310
ChainResidue
ALEU179
APRO210
AGLU264
ANA302
AHOH403
BGLU16
BHOH219

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 311
ChainResidue
APHE8
ATYR27
AASP29
AHOH405
BHOH213

site_idAD3
Number of Residues3
Detailsbinding site for residue EDO A 312
ChainResidue
AGLU166
ATRP167
AARG170

site_idAD4
Number of Residues6
Detailsbinding site for residue EDO A 313
ChainResidue
ATHR178
AASP183
ATYR209
AGLY239
ANA303
AHOH451

site_idAD5
Number of Residues6
Detailsbinding site for residue BO3 A 314
ChainResidue
AEDO305
AHOH527
BSER88
BGLY89
BPRO90
BARG91

site_idAD6
Number of Residues6
Detailsbinding site for residue NA B 101
ChainResidue
BHIS84
BLEU87
BHOH209
BHOH255
BHOH278
BHOH287

site_idAD7
Number of Residues6
Detailsbinding site for residue EDO B 102
ChainResidue
AARG157
AHOH483
BLYS6
BILE7
BHOH203
BHOH217

site_idAD8
Number of Residues4
Detailsbinding site for residue EDO B 103
ChainResidue
BTHR4
BGLY29
BHOH210
BHOH214

site_idAD9
Number of Residues2
Detailsbinding site for residue EDO B 104
ChainResidue
BSER33
BASP34

site_idAE1
Number of Residues10
Detailsbinding site for residue EDO B 105
ChainResidue
BMET99
BHOH205
BHOH280
ATRP204
BTYR10
BSER11
BPRO15
BTRP95
BASP96
BARG97

site_idAE2
Number of Residues4
Detailsbinding site for residue EDO B 106
ChainResidue
AGLY237
AHOH484
BSER52
BTYR67

site_idAE3
Number of Residues5
Detailsbinding site for residue EDO B 107
ChainResidue
AGLU232
ATHR233
BTYR26
BSER28
BHOH204

site_idAE4
Number of Residues4
Detailsbinding site for residue EDO B 108
ChainResidue
APHE8
BPHE56
BSER57
BLYS58

site_idAE5
Number of Residues6
Detailsbinding site for residue EDO B 109
ChainResidue
BLYS41
BMET46
BGLU69
BPHE70
BTHR71
BTYR78

site_idAE6
Number of Residues4
Detailsbinding site for residue BO3 B 110
ChainResidue
BLYS58
BASP59
BHOH257
BHOH275

site_idAE7
Number of Residues5
Detailsbinding site for residue BO3 B 111
ChainResidue
AARG131
AARG157
AHOH533
BTHR92
BHOH206

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCHVQH
ChainResidueDetails
ATYR257-HIS263
BTYR78-HIS84

221051

PDB entries from 2024-06-12

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