6IUY
Structure of DsGPDH of Dunaliella salina
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005975 | biological_process | carbohydrate metabolic process |
A | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
A | 0006116 | biological_process | NADH oxidation |
A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0046168 | biological_process | glycerol-3-phosphate catabolic process |
A | 0051287 | molecular_function | NAD binding |
B | 0005975 | biological_process | carbohydrate metabolic process |
B | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
B | 0006116 | biological_process | NADH oxidation |
B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0046168 | biological_process | glycerol-3-phosphate catabolic process |
B | 0051287 | molecular_function | NAD binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 29 |
Details | binding site for residue NAD A 701 |
Chain | Residue |
A | SER339 |
A | PHE430 |
A | THR454 |
A | LYS455 |
A | ASN486 |
A | ILE487 |
A | ALA488 |
A | ARG603 |
A | GLN635 |
A | LYS636 |
A | GLN638 |
A | GLY340 |
A | 13P702 |
A | HOH829 |
A | HOH834 |
A | HOH852 |
A | HOH855 |
A | HOH858 |
A | HOH875 |
A | HOH913 |
A | HOH920 |
A | HOH934 |
A | ALA341 |
A | TRP342 |
A | ALA343 |
A | HIS374 |
A | TYR396 |
A | ALA426 |
A | PRO427 |
site_id | AC2 |
Number of Residues | 11 |
Details | binding site for residue 13P A 702 |
Chain | Residue |
A | LYS455 |
A | LYS539 |
A | ASN540 |
A | GLY602 |
A | ARG603 |
A | ASN604 |
A | NAD701 |
A | HOH819 |
A | HOH832 |
A | HOH841 |
A | HOH858 |
site_id | AC3 |
Number of Residues | 7 |
Details | binding site for residue GOL A 703 |
Chain | Residue |
A | ASP116 |
A | ASP118 |
A | GLY208 |
A | LYS260 |
A | SER284 |
A | ARG308 |
A | MG704 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue MG A 704 |
Chain | Residue |
A | ASP116 |
A | ASP118 |
A | ASP281 |
A | GOL703 |
site_id | AC5 |
Number of Residues | 23 |
Details | binding site for residue NAD B 701 |
Chain | Residue |
B | GLY340 |
B | ALA341 |
B | TRP342 |
B | ALA343 |
B | HIS374 |
B | GLU376 |
B | TYR396 |
B | PRO427 |
B | PHE430 |
B | LEU453 |
B | THR454 |
B | LYS455 |
B | ASN486 |
B | ILE487 |
B | ALA488 |
B | ARG603 |
B | GLN635 |
B | LYS636 |
B | GLN638 |
B | 13P702 |
B | HOH850 |
B | HOH858 |
B | HOH863 |
site_id | AC6 |
Number of Residues | 9 |
Details | binding site for residue 13P B 702 |
Chain | Residue |
B | LYS455 |
B | ILE487 |
B | LYS539 |
B | ASN540 |
B | GLY602 |
B | ARG603 |
B | ASN604 |
B | NAD701 |
B | HOH857 |
site_id | AC7 |
Number of Residues | 3 |
Details | binding site for residue MG B 703 |
Chain | Residue |
B | ASP116 |
B | ASP118 |
B | ASP281 |
Functional Information from PROSITE/UniProt
site_id | PS00957 |
Number of Residues | 22 |
Details | NAD_G3PDH NAD-dependent glycerol-3-phosphate dehydrogenase signature. GTLKNIVAvGaGIgdGLgVGpN |
Chain | Residue | Details |
A | GLY536-ASN557 |