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6IJR

Human PPARgamma ligand binding domain complexed with SB1495

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
C0003677molecular_functionDNA binding
C0004879molecular_functionnuclear receptor activity
C0005634cellular_componentnucleus
C0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue A9C A 501
ChainResidue
AHIS266
AILE341
ASER342
ALEU353
AMET364
ATHR268
AILE281
APHE282
ACYS285
AARG288
ASER289
ATYR327
ALEU330

site_idAC2
Number of Residues17
Detailsbinding site for Di-peptide A9C C 501 and CYS C 285
ChainResidue
CHIS266
CTHR268
CILE281
CPHE282
CGLN283
CGLY284
CGLN286
CPHE287
CARG288
CSER289
CTYR327
CLEU330
CILE341
CSER342
CLEU353
CPHE363
CMET364

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues530
DetailsDomain: {"description":"NR LBD","evidences":[{"source":"PROSITE-ProRule","id":"PRU01189","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsMotif: {"description":"9aaTAD","evidences":[{"source":"PubMed","id":"30468856","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9744270","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2PRG","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"36737649","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues8
DetailsMotif: {"description":"LXXLL motif 4"}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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