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6I5D

Crystal structure of an OXA-48 beta-lactamase synthetic mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0017001biological_processantibiotic catabolic process
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0017001biological_processantibiotic catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue GOL A 301
ChainResidue
AASN200
AHOH452
AHOH539
AHOH544
BLYS116
AGLY201
AASP202
ATYR203
AILE204
AGLU226
ALEU227
AASP228
AHOH434

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 302
ChainResidue
ALYS94
ATRP95
AASP96
AGLU125
AHOH432
AHOH490

site_idAC3
Number of Residues8
Detailsbinding site for residue GOL A 303
ChainResidue
AGLU185
AARG186
AARG189
AHOH476
AHOH487
AHOH492
BARG186
BARG189

site_idAC4
Number of Residues3
Detailsbinding site for residue CL A 304
ChainResidue
AARG206
BARG206
BHOH537

site_idAC5
Number of Residues6
Detailsbinding site for residue NO3 A 305
ChainResidue
ALYS73
AVAL120
ATYR123
ATRP157
AHOH405
AHOH525

site_idAC6
Number of Residues4
Detailsbinding site for residue NO3 A 306
ChainResidue
ATRP105
AVAL120
ATHR213
AARG214

site_idAC7
Number of Residues4
Detailsbinding site for residue NO3 A 307
ChainResidue
ALEU81
ASER184
AARG186
ASER187

site_idAC8
Number of Residues7
Detailsbinding site for residue NO3 A 308
ChainResidue
ALYS60
AARG61
AGLN64
AHOH423
AHOH424
BGLU147
BHOH420

site_idAC9
Number of Residues5
Detailsbinding site for residue NO3 A 309
ChainResidue
AARG174
ALYS175
AHIS178
ALYS180
AHOH483

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 310
ChainResidue
ATRP47
ASER171
AARG174

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO A 311
ChainResidue
AASN32
AGLN41
AGLY42
AASN57
AASN58
AHOH424

site_idAD3
Number of Residues6
Detailsbinding site for residue EDO A 312
ChainResidue
AALA65
AGLY145
AASN146
AARG163
AGLU168
BLYS60

site_idAD4
Number of Residues6
Detailsbinding site for residue EDO A 313
ChainResidue
APHE66
ALEU67
ALYS217
AILE218
AHOH431
AHOH472

site_idAD5
Number of Residues4
Detailsbinding site for residue EDO A 314
ChainResidue
ALEU83
AVAL85
AARG134
AHOH453

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO A 315
ChainResidue
AALA141
APHE142
ALYS180
ALEU181
AHIS182

site_idAD7
Number of Residues9
Detailsbinding site for residue EDO A 316
ChainResidue
ALYS73
AMET115
ASER118
ALYS208
ATHR209
AGLY210
ATYR211
ALEU246
AHOH495

site_idAD8
Number of Residues6
Detailsbinding site for residue PEG A 317
ChainResidue
BASP228
BASP229
AASP108
AASN110
ATHR113
AHOH469

site_idAD9
Number of Residues5
Detailsbinding site for residue PO4 B 301
ChainResidue
BGLU132
BSER136
BILE149
BLYS217
BHOH451

site_idAE1
Number of Residues5
Detailsbinding site for residue GOL B 302
ChainResidue
BASN32
BGLN41
BGLY42
BASN58
BHOH437

site_idAE2
Number of Residues6
Detailsbinding site for residue GOL B 303
ChainResidue
BTRP25
BTHR167
BSER171
BARG174
BHOH474
BHOH534

site_idAE3
Number of Residues6
Detailsbinding site for residue GOL B 304
ChainResidue
AASN179
AGLU185
AARG189
BLYS87
BASP88
BARG186

site_idAE4
Number of Residues7
Detailsbinding site for residue GOL B 305
ChainResidue
AASP228
BVAL92
BASP108
BASN110
BTHR113
BHOH431
BHOH494

site_idAE5
Number of Residues12
Detailsbinding site for residue GOL B 306
ChainResidue
ASER150
AGLY151
AGLY160
AGLY161
BILE130
BGLY131
BGLU132
BALA133
BARG134
BHOH405
BHOH434
BHOH448

site_idAE6
Number of Residues11
Detailsbinding site for residue GOL B 307
ChainResidue
ALYS116
ALYS208
AHOH427
BASN200
BGLY201
BASP202
BTYR203
BILE204
BHOH411
BHOH424
BHOH478

site_idAE7
Number of Residues7
Detailsbinding site for residue GOL B 308
ChainResidue
BLYS94
BTRP95
BASP96
BARG100
BGLU125
BGOL310
BHOH480

site_idAE8
Number of Residues5
Detailsbinding site for residue GOL B 309
ChainResidue
BALA65
BASN146
BARG163
BHOH452
BHOH469

site_idAE9
Number of Residues9
Detailsbinding site for residue GOL B 310
ChainResidue
ASER243
AASP244
AHOH480
BARG100
BPRO121
BGLN124
BGLU125
BARG128
BGOL308

site_idAF1
Number of Residues2
Detailsbinding site for residue GOL B 311
ChainResidue
BGLY160
BGLY161

site_idAF2
Number of Residues4
Detailsbinding site for residue NO3 B 312
ChainResidue
BLYS73
BTYR123
BTRP157
BHOH425

site_idAF3
Number of Residues5
Detailsbinding site for residue EDO B 313
ChainResidue
BARG174
BLYS175
BHIS178
BLYS180
BHOH440

site_idAF4
Number of Residues5
Detailsbinding site for residue EDO B 314
ChainResidue
BLEU227
BASP228
BASP229
BHOH419
BHOH463

site_idAF5
Number of Residues10
Detailsbinding site for residue EDO B 315
ChainResidue
BTHR197
BALA207
BLYS208
BTHR209
BGLY210
BTYR211
BTRP221
BLEU246
BGLN250
BHOH505

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnSL
ChainResidueDetails
APRO68-LEU78

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PDB entries from 2024-06-12

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