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6HY1

Plasmodium falciparum spermidine synthase in complex with 5'-methylthioadenosine and N,N'-Bis(3-aminopropyl)-1,4-cyclohexanediamine after catalysis in crystal

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
B0003824molecular_functioncatalytic activity
C0003824molecular_functioncatalytic activity
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue GXQ A 401
ChainResidue
ATRP51
AGLN229
AGLU231
ATYR264
AMTA402
AHOH550
AILE92
AGLN93
ATYR102
AHIS103
AASP127
AASP196
ASER197
AASP199

site_idAC2
Number of Residues18
Detailsbinding site for residue MTA A 402
ChainResidue
AGLN72
AGLN93
AGLY124
AGLY125
AASP127
ACYS146
AGLU147
AILE148
AVAL152
AASP178
AALA179
AASP196
ASER198
APRO203
AALA204
ATHR206
ALEU207
AGXQ401

site_idAC3
Number of Residues9
Detailsbinding site for residue 1PG A 403
ChainResidue
ATRP43
ATRP43
ASER45
ASER45
APHE47
APHE47
ASER57
AHOH511
AHOH511

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL A 404
ChainResidue
ALYS97
APHE100
ATRP234
AHOH577

site_idAC5
Number of Residues16
Detailsbinding site for residue GXQ B 401
ChainResidue
BILE92
BGLN93
BTYR102
BHIS103
BASP127
BASP196
BSER197
BASP199
BGLU231
BSER232
BTYR264
BILE269
BMTA402
BHOH503
BHOH559
BHOH577

site_idAC6
Number of Residues19
Detailsbinding site for residue MTA B 402
ChainResidue
BGLN72
BGLY124
BGLY125
BASP127
BCYS146
BGLU147
BILE148
BVAL152
BGLU177
BASP178
BALA179
BASP196
BSER197
BSER198
BPRO203
BALA204
BTHR206
BLEU207
BGXQ401

site_idAC7
Number of Residues6
Detailsbinding site for residue GOL B 403
ChainResidue
BLYS97
BLYS297
BHOH543
BHOH565
BHOH575
CTRP234

site_idAC8
Number of Residues5
Detailsbinding site for residue 1PG B 404
ChainResidue
BPHE47
BSER57
CTRP43
CPHE47
CSER57

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL B 405
ChainResidue
BLYS286
BLYS287
BGLU289
BSER290
BPHE293

site_idAD1
Number of Residues4
Detailsbinding site for residue GOL B 406
ChainResidue
BLYS291
BHIS236
BVAL237
BGLY238

site_idAD2
Number of Residues14
Detailsbinding site for residue JFQ C 401
ChainResidue
CILE92
CGLN93
CTYR102
CHIS103
CASP127
CASP196
CSER197
CASP199
CGLN229
CTYR264
CILE269
CMTA402
CHOH562
CHOH594

site_idAD3
Number of Residues21
Detailsbinding site for residue MTA C 402
ChainResidue
CGLN72
CGLN93
CGLY124
CGLY125
CASP127
CCYS146
CGLU147
CILE148
CASP149
CVAL152
CGLU177
CASP178
CALA179
CASP196
CSER197
CSER198
CPRO203
CALA204
CTHR206
CLEU207
CJFQ401

site_idAD4
Number of Residues7
Detailsbinding site for residue GOL C 403
ChainResidue
BTRP234
CLYS97
CLYS297
CHOH522
CHOH549
CHOH584
CHOH598

site_idAD5
Number of Residues5
Detailsbinding site for residue GOL C 404
ChainResidue
CPHE208
CTHR239
CASN242
CTYR246
CHOH645

site_idAD6
Number of Residues10
Detailsbinding site for residue GOL C 405
ChainResidue
BPHE56
BPRO262
BCYS266
CPRO262
CPRO265
CCYS266
CGLY267
CHOH540
CHOH629
CHOH639

Functional Information from PROSITE/UniProt
site_idPS01330
Number of Residues14
DetailsPABS_1 Polyamine biosynthesis (PABS) domain signature. VLVVGGGdGgiIrE
ChainResidueDetails
AVAL120-GLU133

225946

PDB entries from 2024-10-09

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