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6HCU

Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum bound to a difluoro cyclohexyl chromone ligand

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004824molecular_functionlysine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006418biological_processtRNA aminoacylation for protein translation
A0006430biological_processlysyl-tRNA aminoacylation
B0000166molecular_functionnucleotide binding
B0003676molecular_functionnucleic acid binding
B0004812molecular_functionaminoacyl-tRNA ligase activity
B0004824molecular_functionlysine-tRNA ligase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006418biological_processtRNA aminoacylation for protein translation
B0006430biological_processlysyl-tRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue FYB A 601
ChainResidue
AARG330
AGLY556
AARG559
AILE570
ATRS606
AHOH872
AHOH909
AHOH1040
AGLU332
ATHR337
AHIS338
AASN339
APHE342
AGLU500
AGLY554
ALEU555

site_idAC2
Number of Residues12
Detailsbinding site for residue LYS A 602
ChainResidue
ALYS321
ATRP349
AALA350
ATYR351
AALA352
AHOH716
AHOH748
AHOH1203
BLYS105
BGLU107
BARG108
BHOH727

site_idAC3
Number of Residues5
Detailsbinding site for residue PEG A 603
ChainResidue
AARG235
AHOH703
AHOH1137
BHOH954
BHOH1044

site_idAC4
Number of Residues2
Detailsbinding site for residue HIS A 604
ChainResidue
AHIS435
AHIS455

site_idAC5
Number of Residues9
Detailsbinding site for residue TRS A 605
ChainResidue
AARG262
AILE325
AHOH749
AHOH793
BARG262
BGLU272
BGLU274
BILE325
BHOH848

site_idAC6
Number of Residues10
Detailsbinding site for residue TRS A 606
ChainResidue
AALA306
AGLU308
AGLU346
ATYR348
AASN503
ATYR505
AGLY554
AFYB601
AHOH902
AHOH906

site_idAC7
Number of Residues15
Detailsbinding site for residue FYB B 601
ChainResidue
BARG330
BTHR337
BHIS338
BASN339
BPHE342
BGLU500
BGLY554
BLEU555
BGLY556
BARG559
BILE570
BTRS603
BHOH745
BHOH880
BHOH978

site_idAC8
Number of Residues12
Detailsbinding site for residue TRS B 602
ChainResidue
ALYS105
AARG108
AHOH1001
BLYS321
BTRP349
BALA350
BTYR351
BASP356
BHOH701
BHOH704
BHOH724
BHOH928

site_idAC9
Number of Residues8
Detailsbinding site for residue TRS B 603
ChainResidue
BGLU308
BGLU346
BTYR348
BASN503
BTYR505
BLEU553
BFYB601
BHOH719

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PDB entries from 2024-04-24

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