6HCU
Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum bound to a difluoro cyclohexyl chromone ligand
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
A | 0004824 | molecular_function | lysine-tRNA ligase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0006418 | biological_process | tRNA aminoacylation for protein translation |
A | 0006430 | biological_process | lysyl-tRNA aminoacylation |
B | 0000166 | molecular_function | nucleotide binding |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
B | 0004824 | molecular_function | lysine-tRNA ligase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0006418 | biological_process | tRNA aminoacylation for protein translation |
B | 0006430 | biological_process | lysyl-tRNA aminoacylation |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 16 |
Details | binding site for residue FYB A 601 |
Chain | Residue |
A | ARG330 |
A | GLY556 |
A | ARG559 |
A | ILE570 |
A | TRS606 |
A | HOH872 |
A | HOH909 |
A | HOH1040 |
A | GLU332 |
A | THR337 |
A | HIS338 |
A | ASN339 |
A | PHE342 |
A | GLU500 |
A | GLY554 |
A | LEU555 |
site_id | AC2 |
Number of Residues | 12 |
Details | binding site for residue LYS A 602 |
Chain | Residue |
A | LYS321 |
A | TRP349 |
A | ALA350 |
A | TYR351 |
A | ALA352 |
A | HOH716 |
A | HOH748 |
A | HOH1203 |
B | LYS105 |
B | GLU107 |
B | ARG108 |
B | HOH727 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue PEG A 603 |
Chain | Residue |
A | ARG235 |
A | HOH703 |
A | HOH1137 |
B | HOH954 |
B | HOH1044 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue HIS A 604 |
Chain | Residue |
A | HIS435 |
A | HIS455 |
site_id | AC5 |
Number of Residues | 9 |
Details | binding site for residue TRS A 605 |
Chain | Residue |
A | ARG262 |
A | ILE325 |
A | HOH749 |
A | HOH793 |
B | ARG262 |
B | GLU272 |
B | GLU274 |
B | ILE325 |
B | HOH848 |
site_id | AC6 |
Number of Residues | 10 |
Details | binding site for residue TRS A 606 |
Chain | Residue |
A | ALA306 |
A | GLU308 |
A | GLU346 |
A | TYR348 |
A | ASN503 |
A | TYR505 |
A | GLY554 |
A | FYB601 |
A | HOH902 |
A | HOH906 |
site_id | AC7 |
Number of Residues | 15 |
Details | binding site for residue FYB B 601 |
Chain | Residue |
B | ARG330 |
B | THR337 |
B | HIS338 |
B | ASN339 |
B | PHE342 |
B | GLU500 |
B | GLY554 |
B | LEU555 |
B | GLY556 |
B | ARG559 |
B | ILE570 |
B | TRS603 |
B | HOH745 |
B | HOH880 |
B | HOH978 |
site_id | AC8 |
Number of Residues | 12 |
Details | binding site for residue TRS B 602 |
Chain | Residue |
A | LYS105 |
A | ARG108 |
A | HOH1001 |
B | LYS321 |
B | TRP349 |
B | ALA350 |
B | TYR351 |
B | ASP356 |
B | HOH701 |
B | HOH704 |
B | HOH724 |
B | HOH928 |
site_id | AC9 |
Number of Residues | 8 |
Details | binding site for residue TRS B 603 |
Chain | Residue |
B | GLU308 |
B | GLU346 |
B | TYR348 |
B | ASN503 |
B | TYR505 |
B | LEU553 |
B | FYB601 |
B | HOH719 |