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6H0X

Crystal Structure of KDM4D with tetrazolylhydrazide ligand AA040

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS238
AHIS244
ACYS310
ACYS312

site_idAC2
Number of Residues2
Detailsbinding site for residue CL A 402
ChainResidue
AASN128
ALYS186

site_idAC3
Number of Residues2
Detailsbinding site for residue EDO A 403
ChainResidue
ALYS124
AASN128

site_idAC4
Number of Residues3
Detailsbinding site for residue EDO A 404
ChainResidue
ATHR252
AARG263
APRO251

site_idAC5
Number of Residues8
Detailsbinding site for residue EDO A 405
ChainResidue
ATYR181
AGLU194
AALA292
AASN294
ATHR318
AFJB407
AHOH649
AHOH735

site_idAC6
Number of Residues5
Detailsbinding site for residue NI A 406
ChainResidue
AHIS192
AGLU194
AHIS280
AFJB407
AHOH640

site_idAC7
Number of Residues18
Detailsbinding site for residue FJB A 407
ChainResidue
AHIS90
ATYR136
ATYR181
AHIS192
AGLU194
AASN202
ALYS210
ALYS245
AHIS280
AARG316
AEDO405
ANI406
AHOH620
AHOH640
AHOH649
AHOH680
AHOH687
AHOH735

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:B2RXH2
ChainResidueDetails
ATYR136
AASN202
ALYS210
ALYS245

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00538, ECO:0000305|PubMed:26741168
ChainResidueDetails
AHIS192
AGLU194
AHIS280

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0007744|PDB:5F5A, ECO:0007744|PDB:5F5C
ChainResidueDetails
ACYS238
AHIS244
ACYS310
ACYS312

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: PolyADP-ribosyl glutamic acid => ECO:0000269|PubMed:23102699
ChainResidueDetails
AGLU26
AGLU27

227111

PDB entries from 2024-11-06

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