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6GWG

Alpha-galactosidase from Thermotoga maritima in complex with cyclohexene-based carbasugar mimic of galactose covalently linked to the nucleophile

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004557molecular_functionalpha-galactosidase activity
A0005975biological_processcarbohydrate metabolic process
A0016139biological_processglycoside catabolic process
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0030246molecular_functioncarbohydrate binding
A0042803molecular_functionprotein homodimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue SO4 A 601
ChainResidue
AHIS-3
AGLY-5
ASER-4
AMET-2
AGLU156
AASN290
ATRP291
AASN292
AHOH753

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 602
ChainResidue
ALYS302
AASP303
AGLU304
ALYS339

site_idAC3
Number of Residues6
Detailsbinding site for residue SO4 A 603
ChainResidue
AARG9
ATRP392
AGLY393
AGLU394
AHOH747
AHOH800

site_idAC4
Number of Residues3
Detailsbinding site for residue SO4 A 604
ChainResidue
AGLU434
ALYS435
ATHR436

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 605
ChainResidue
AARG86
ATYR87
APRO93
ALYS285
APRO335

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 606
ChainResidue
AASN159
AARG486
AGLN488
ASO4608
AHOH704

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 A 607
ChainResidue
ATHR354
ALYS357
AHIS521
AHOH854
AHOH876

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 A 608
ChainResidue
AASN159
ALEU162
AARG486
ASO4606

site_idAC9
Number of Residues13
Detailsbinding site for residue FEK A 609
ChainResidue
ASER-4
ATRP65
ATRP190
ATYR191
AASP220
AASP221
ATRP257
ALYS325
AASP327
APHE328
ACYS368
AARG383
AASP387

site_idAD1
Number of Residues1
Detailsbinding site for residue MG A 610
ChainResidue
AASN341

site_idAD2
Number of Residues4
Detailsbinding site for residue MG A 611
ChainResidue
AGLU2
AHOH705
AHOH891
AHOH997

site_idAD3
Number of Residues6
Detailsbinding site for residue MG A 612
ChainResidue
AASP419
AASP454
AHOH781
AHOH855
AHOH871
AHOH991

site_idAD4
Number of Residues8
Detailsbinding site for residue GOL A 613
ChainResidue
APRO238
ASER239
AGLU242
AASP275
AGLY282
AGLU283
AHOH706
AHOH726

site_idAD5
Number of Residues3
Detailsbinding site for residue GOL A 614
ChainResidue
APRO180
ALYS181
AHIS182

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:17323919
ChainResidueDetails
AASP327

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000269|PubMed:17323919
ChainResidueDetails
AASP387

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:27783466, ECO:0007744|PDB:5M16
ChainResidueDetails
ATRP65
ATYR191
AASP220
ALYS325
ACYS368
AARG383

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PDB entries from 2024-10-30

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