6GLC
Structure of phospho-Parkin bound to phospho-ubiquitin
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 501 |
| Chain | Residue |
| A | CYS253 |
| A | HIS257 |
| A | CYS289 |
| A | CYS293 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 502 |
| Chain | Residue |
| A | CYS365 |
| A | CYS368 |
| A | HIS373 |
| A | CYS377 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 503 |
| Chain | Residue |
| A | CYS169 |
| A | CYS196 |
| A | CYS201 |
| A | CYS166 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 504 |
| Chain | Residue |
| A | CYS238 |
| A | CYS241 |
| A | CYS260 |
| A | CYS263 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 505 |
| Chain | Residue |
| A | CYS332 |
| A | CYS337 |
| A | CYS352 |
| A | CYS360 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 506 |
| Chain | Residue |
| A | CYS150 |
| A | CYS154 |
| A | CYS212 |
| A | HIS215 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 507 |
| Chain | Residue |
| A | PRO14 |
| A | GLU16 |
| A | CYS263 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 508 |
| Chain | Residue |
| A | PRO14 |
| A | ARG245 |
| A | CYS263 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 509 |
| Chain | Residue |
| A | PHE4 |
| A | GLY12 |
| A | ILE66 |
| A | SER218 |
| A | THR242 |
| A | HOH649 |
| site_id | AD1 |
| Number of Residues | 7 |
| Details | binding site for residue MPD A 510 |
| Chain | Residue |
| A | LYS299 |
| A | GLU300 |
| A | LEU301 |
| A | HIS302 |
| B | PHE45 |
| B | ASP58 |
| B | TYR59 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 B 101 |
| Chain | Residue |
| B | ARG42 |
| B | ARG72 |
| B | ARG74 |
Functional Information from PROSITE/UniProt
| site_id | PS00299 |
| Number of Residues | 26 |
| Details | UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD |
| Chain | Residue | Details |
| B | LYS27-ASP52 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 84 |
| Details | Zinc finger: {"description":"RING-type 0; atypical"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 55 |
| Details | Zinc finger: {"description":"RING-type 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 34 |
| Details | Region: {"description":"SYT11 binding 1","evidences":[{"source":"PubMed","id":"12925569","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 36 |
| Details | Region: {"description":"SYT11 binding 2","evidences":[{"source":"PubMed","id":"12925569","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 9 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01221","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"23770917","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by PINK1","evidences":[{"source":"PubMed","id":"18957282","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23754282","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24660806","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24784582","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25474007","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine; by PINK1","evidences":[{"source":"PubMed","id":"18957282","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18957282","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 3 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ISG15)","evidences":[{"source":"PubMed","id":"27534820","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
