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6GKK

Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 1 (m7GppSpApG D1)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
B0003723molecular_functionRNA binding
B0003743molecular_functiontranslation initiation factor activity
B0005737cellular_componentcytoplasm
B0006413biological_processtranslational initiation
C0003723molecular_functionRNA binding
C0003743molecular_functiontranslation initiation factor activity
C0005737cellular_componentcytoplasm
C0006413biological_processtranslational initiation
D0003723molecular_functionRNA binding
D0003743molecular_functiontranslation initiation factor activity
D0005737cellular_componentcytoplasm
D0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue WZO A 301
ChainResidue
ATRP56
AHOH452
AMET101
ATRP102
AGLU103
AARG157
ALYS162
AHOH427
AHOH435
AHOH441

site_idAC2
Number of Residues5
Detailsbinding site for residue GOL A 302
ChainResidue
AILE115
ATHR116
AGLN121
AHOH405
AHOH431

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL A 303
ChainResidue
ATYR76
AASP127
AARG128
AHOH413
AHOH437

site_idAC4
Number of Residues10
Detailsbinding site for residue WZO B 301
ChainResidue
BTRP56
BMET101
BTRP102
BGLU103
BARG157
BLYS162
BHOH415
BHOH435
BHOH439
BHOH458

site_idAC5
Number of Residues4
Detailsbinding site for residue GOL B 302
ChainResidue
BILE115
BTHR116
BGLN121
BHOH401

site_idAC6
Number of Residues7
Detailsbinding site for residue WZO C 300
ChainResidue
CTRP56
CMET101
CTRP102
CGLU103
CASN155
CARG157
CLYS162

site_idAC7
Number of Residues5
Detailsbinding site for residue WZO D 300
ChainResidue
DTRP56
DMET101
DTRP102
DGLU103
DARG157

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYslFKdgIePmWEDeknkrGGRW
ChainResidueDetails
AASP90-TRP113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:10394359, ECO:0000269|PubMed:9200613
ChainResidueDetails
ATRP56
CTRP102
CARG157
CTHR205
DTRP56
DTRP102
DARG157
DTHR205
ATRP102
AARG157
ATHR205
BTRP56
BTRP102
BARG157
BTHR205
CTRP56

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: Phosphoserine; by PKC and MKNK2 => ECO:0000269|PubMed:17689282
ChainResidueDetails
ASER209
BSER209
CSER209
DSER209

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PDB entries from 2024-07-31

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