6GKK
Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 1 (m7GppSpApG D1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-01 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 1 |
Unit cell lengths | 38.100, 38.150, 146.910 |
Unit cell angles | 88.86, 84.64, 76.59 |
Refinement procedure
Resolution | 22.067 - 1.858 |
R-factor | 0.1964 |
Rwork | 0.195 |
R-free | 0.23410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5m7x |
RMSD bond length | 0.010 |
RMSD bond angle | 1.223 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.760 | 1.910 |
High resolution limit [Å] | 1.858 | 1.858 |
Rmerge | 0.100 | 1.111 |
Rmeas | 0.108 | 1.263 |
Number of reflections | 66480 | 4669 |
<I/σ(I)> | 13.76 | 1.21 |
Completeness [%] | 98.3 | 90.8 |
Redundancy | 6.819 | 4.216 |
CC(1/2) | 0.999 | 0.582 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 19% PEG 10000, 0.1M TrisHCl pH 8.0, 0.2M CH3COONH4 |