6GBS
Crystal Structure of the C. themophilum Scavenger Decapping Enzyme DcpS apo form
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000288 | biological_process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
| A | 0000290 | biological_process | deadenylation-dependent decapping of nuclear-transcribed mRNA |
| A | 0000340 | molecular_function | RNA 7-methylguanosine cap binding |
| A | 0000932 | cellular_component | P-body |
| A | 0005634 | cellular_component | nucleus |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0110156 | biological_process | mRNA methylguanosine-cap decapping |
| B | 0000288 | biological_process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
| B | 0000290 | biological_process | deadenylation-dependent decapping of nuclear-transcribed mRNA |
| B | 0000340 | molecular_function | RNA 7-methylguanosine cap binding |
| B | 0000932 | cellular_component | P-body |
| B | 0005634 | cellular_component | nucleus |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0110156 | biological_process | mRNA methylguanosine-cap decapping |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 401 |
| Chain | Residue |
| A | ARG204 |
| A | LYS216 |
| A | HIS217 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 402 |
| Chain | Residue |
| A | THR238 |
| A | GLN243 |
| A | HIS263 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue EDO A 403 |
| Chain | Residue |
| A | ALA268 |
| A | HOH571 |
| B | ALA270 |
| B | THR312 |
| B | HOH517 |
| A | LYS245 |
| A | VAL264 |
| A | LEU266 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 404 |
| Chain | Residue |
| A | ARG145 |
| A | TYR154 |
| B | ASP36 |
| B | GLN38 |
| B | TYR108 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 405 |
| Chain | Residue |
| A | ARG204 |
| A | ARG205 |
| B | GLY37 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | binding site for residue EDO A 406 |
| Chain | Residue |
| A | GLU285 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue EDO A 407 |
| Chain | Residue |
| A | HIS249 |
| A | PRO252 |
| A | THR253 |
| A | TYR254 |
| A | ASN258 |
| A | HIS260 |
| A | HOH505 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue PEG A 408 |
| Chain | Residue |
| A | ILE87 |
| A | GLU98 |
| A | ALA100 |
| B | THR67 |
| B | LEU79 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | binding site for residue EDO B 401 |
| Chain | Residue |
| B | GLU288 |
| B | HIS289 |
| site_id | AD1 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 402 |
| Chain | Residue |
| B | GLU177 |
| B | ARG204 |
| B | LYS216 |
| B | HIS217 |
| site_id | AD2 |
| Number of Residues | 1 |
| Details | binding site for residue EDO B 403 |
| Chain | Residue |
| B | GLU285 |
| site_id | AD3 |
| Number of Residues | 5 |
| Details | binding site for residue EDO B 404 |
| Chain | Residue |
| A | PRO109 |
| B | ASP73 |
| B | ARG138 |
| B | GLN142 |
| B | HOH616 |
| site_id | AD4 |
| Number of Residues | 5 |
| Details | binding site for residue EDO B 405 |
| Chain | Residue |
| B | HIS249 |
| B | PRO252 |
| B | THR253 |
| B | ASN258 |
| B | HIS260 |
