Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GBK

Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions

Functional Information from GO Data
ChainGOidnamespacecontents
A0004063molecular_functionaryldialkylphosphatase activity
A0005886cellular_componentplasma membrane
A0008270molecular_functionzinc ion binding
A0009056biological_processcatabolic process
A0016787molecular_functionhydrolase activity
A0016788molecular_functionhydrolase activity, acting on ester bonds
A0046872molecular_functionmetal ion binding
B0004063molecular_functionaryldialkylphosphatase activity
B0005886cellular_componentplasma membrane
B0008270molecular_functionzinc ion binding
B0009056biological_processcatabolic process
B0016787molecular_functionhydrolase activity
B0016788molecular_functionhydrolase activity, acting on ester bonds
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue FMT A 401
ChainResidue
AHIS55
AHIS57
AVAL101
ALYS169
AHIS201
AHIS230
AZN402
AZN403
AHOH575

site_idAC2
Number of Residues5
Detailsbinding site for residue ZN A 402
ChainResidue
AHIS55
AHIS57
AASP301
AFMT401
AHOH575

site_idAC3
Number of Residues5
Detailsbinding site for residue ZN A 403
ChainResidue
AHIS201
AHIS230
AFMT401
AHOH575
AHOH627

site_idAC4
Number of Residues10
Detailsbinding site for residue TRS A 404
ChainResidue
AHIS230
AASP233
AASP253
AGLY254
AHIS257
ALEU271
AARG280
AASP301
AHOH504
AHOH604

site_idAC5
Number of Residues5
Detailsbinding site for residue ZN B 402
ChainResidue
BHIS55
BHIS57
BASP301
BFMT401
BHOH567

site_idAC6
Number of Residues5
Detailsbinding site for residue ZN B 403
ChainResidue
BHIS201
BHIS230
BFMT401
BHOH567
BHOH612

site_idAC7
Number of Residues15
Detailsbinding site for Di-peptide FMT B 401 and LYS B 169
ChainResidue
BHIS55
BHIS57
BVAL101
BTHR103
BTHR128
BGLY129
BLEU130
BILE168
BVAL170
BTHR199
BHIS201
BHIS230
BZN402
BZN403
BHOH567

Functional Information from PROSITE/UniProt
site_idPS01322
Number of Residues9
DetailsPHOSPHOTRIESTERASE_1 Phosphotriesterase family signature 1. GfTLmHEHI
ChainResidueDetails
AGLY50-ILE58

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:7794910, ECO:0007744|PDB:1DPM, ECO:0007744|PDB:1EYW, ECO:0007744|PDB:1EZ2, ECO:0007744|PDB:1HZY, ECO:0007744|PDB:2O4M, ECO:0007744|PDB:2O4Q, ECO:0007744|PDB:2OB3, ECO:0007744|PDB:2OQL
ChainResidueDetails
AHIS55
BASP301
AHIS57
AHIS201
AHIS230
AASP301
BHIS55
BHIS57
BHIS201
BHIS230

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: via carbamate group => ECO:0000269|PubMed:7794910, ECO:0007744|PDB:1DPM, ECO:0007744|PDB:1EYW, ECO:0007744|PDB:1EZ2, ECO:0007744|PDB:1HZY, ECO:0007744|PDB:2O4M, ECO:0007744|PDB:2O4Q, ECO:0007744|PDB:2OB3, ECO:0007744|PDB:2OQL
ChainResidueDetails
ALYS169
BLYS169

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-carboxylysine => ECO:0000255|PROSITE-ProRule:PRU00679, ECO:0000269|PubMed:7794910, ECO:0007744|PDB:1DPM, ECO:0007744|PDB:1EYW, ECO:0007744|PDB:1EZ2, ECO:0007744|PDB:1HZY, ECO:0007744|PDB:2O4M, ECO:0007744|PDB:2O4Q, ECO:0007744|PDB:2OB3, ECO:0007744|PDB:2OQL
ChainResidueDetails
ALYS169
BLYS169

Catalytic Information from CSA
site_idMCSA1
Number of Residues8
DetailsM-CSA 159
ChainResidueDetails
AHIS55metal ligand
AHIS57metal ligand
ALYS169metal ligand
AHIS201metal ligand
AHIS230metal ligand
AASP233hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AGLY254hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
AASP301hydrogen bond acceptor, hydrogen bond donor, metal ligand, proton acceptor, proton donor

site_idMCSA2
Number of Residues8
DetailsM-CSA 159
ChainResidueDetails
BHIS55metal ligand
BHIS57metal ligand
BLYS169metal ligand
BHIS201metal ligand
BHIS230metal ligand
BASP233hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BGLY254hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
BASP301hydrogen bond acceptor, hydrogen bond donor, metal ligand, proton acceptor, proton donor

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon