6GAZ
Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| Aa | 0003735 | molecular_function | structural constituent of ribosome |
| Aa | 0005739 | cellular_component | mitochondrion |
| Aa | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| Ab | 0003735 | molecular_function | structural constituent of ribosome |
| Ab | 0005739 | cellular_component | mitochondrion |
| Ab | 0005840 | cellular_component | ribosome |
| Ab | 0006412 | biological_process | translation |
| Ab | 1990904 | cellular_component | ribonucleoprotein complex |
| AB | 0003735 | molecular_function | structural constituent of ribosome |
| AB | 0005739 | cellular_component | mitochondrion |
| AB | 0005743 | cellular_component | mitochondrial inner membrane |
| AB | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AB | 0005840 | cellular_component | ribosome |
| AB | 0006412 | biological_process | translation |
| AB | 0015935 | cellular_component | small ribosomal subunit |
| AB | 0046872 | molecular_function | metal ion binding |
| AB | 0061668 | biological_process | mitochondrial ribosome assembly |
| AB | 1990904 | cellular_component | ribonucleoprotein complex |
| Ac | 0003735 | molecular_function | structural constituent of ribosome |
| Ac | 0005739 | cellular_component | mitochondrion |
| Ac | 0005743 | cellular_component | mitochondrial inner membrane |
| Ac | 0005840 | cellular_component | ribosome |
| Ac | 0046872 | molecular_function | metal ion binding |
| Ac | 0051536 | molecular_function | iron-sulfur cluster binding |
| Ac | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| Ac | 1990904 | cellular_component | ribonucleoprotein complex |
| AC | 0005739 | cellular_component | mitochondrion |
| AC | 0005840 | cellular_component | ribosome |
| AC | 1990904 | cellular_component | ribonucleoprotein complex |
| Ad | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AE | 0003723 | molecular_function | RNA binding |
| AE | 0003735 | molecular_function | structural constituent of ribosome |
| AE | 0005739 | cellular_component | mitochondrion |
| AE | 0005743 | cellular_component | mitochondrial inner membrane |
| AE | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AE | 0005840 | cellular_component | ribosome |
| AE | 0006412 | biological_process | translation |
| AE | 1990904 | cellular_component | ribonucleoprotein complex |
| Af | 0005739 | cellular_component | mitochondrion |
| Af | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| Af | 0005840 | cellular_component | ribosome |
| Af | 0032543 | biological_process | mitochondrial translation |
| AF | 0003735 | molecular_function | structural constituent of ribosome |
| AF | 0005840 | cellular_component | ribosome |
| AF | 0006412 | biological_process | translation |
| AF | 0019843 | molecular_function | rRNA binding |
| Ag | 0000166 | molecular_function | nucleotide binding |
| Ag | 0003735 | molecular_function | structural constituent of ribosome |
| Ag | 0003924 | molecular_function | GTPase activity |
| Ag | 0005524 | molecular_function | ATP binding |
| Ag | 0005525 | molecular_function | GTP binding |
| Ag | 0005654 | cellular_component | nucleoplasm |
| Ag | 0005739 | cellular_component | mitochondrion |
| Ag | 0005759 | cellular_component | mitochondrial matrix |
| Ag | 0005761 | cellular_component | mitochondrial ribosome |
| Ag | 0005840 | cellular_component | ribosome |
| Ag | 0006915 | biological_process | apoptotic process |
| Ag | 0015935 | cellular_component | small ribosomal subunit |
| Ag | 0032543 | biological_process | mitochondrial translation |
| Ag | 0046872 | molecular_function | metal ion binding |
| Ag | 1990904 | cellular_component | ribonucleoprotein complex |
| AG | 0003729 | molecular_function | mRNA binding |
| AG | 0003735 | molecular_function | structural constituent of ribosome |
| AG | 0005739 | cellular_component | mitochondrion |
| AG | 0005743 | cellular_component | mitochondrial inner membrane |
| AG | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AG | 0005840 | cellular_component | ribosome |
| AG | 0006412 | biological_process | translation |
| AG | 0019843 | molecular_function | rRNA binding |
| AG | 1990904 | cellular_component | ribonucleoprotein complex |
| Ah | 0003735 | molecular_function | structural constituent of ribosome |
| Ah | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AI | 0003723 | molecular_function | RNA binding |
| AI | 0003735 | molecular_function | structural constituent of ribosome |
| AI | 0005739 | cellular_component | mitochondrion |
| AI | 0005743 | cellular_component | mitochondrial inner membrane |
| AI | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AI | 0005840 | cellular_component | ribosome |
| AI | 0006412 | biological_process | translation |
| AI | 0070013 | cellular_component | intracellular organelle lumen |
| AI | 1990904 | cellular_component | ribonucleoprotein complex |
| Aj | 0003735 | molecular_function | structural constituent of ribosome |
| Aj | 0005739 | cellular_component | mitochondrion |
| AJ | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| Ak | 0003735 | molecular_function | structural constituent of ribosome |
| Ak | 0032543 | biological_process | mitochondrial translation |
| AK | 0003735 | molecular_function | structural constituent of ribosome |
| AK | 0005739 | cellular_component | mitochondrion |
| AK | 0005743 | cellular_component | mitochondrial inner membrane |
| AK | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AK | 0005840 | cellular_component | ribosome |
| AK | 0006412 | biological_process | translation |
| AK | 1990904 | cellular_component | ribonucleoprotein complex |
| AL | 0003735 | molecular_function | structural constituent of ribosome |
| AL | 0005739 | cellular_component | mitochondrion |
| AL | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AL | 0005840 | cellular_component | ribosome |
| AL | 0006412 | biological_process | translation |
| AL | 0015935 | cellular_component | small ribosomal subunit |
| AL | 0046872 | molecular_function | metal ion binding |
| AL | 1990904 | cellular_component | ribonucleoprotein complex |
| Am | 0005739 | cellular_component | mitochondrion |
| Am | 0005761 | cellular_component | mitochondrial ribosome |
| Am | 0032543 | biological_process | mitochondrial translation |
| Am | 0046872 | molecular_function | metal ion binding |
| An | 0005634 | cellular_component | nucleus |
| An | 0005654 | cellular_component | nucleoplasm |
| An | 0005739 | cellular_component | mitochondrion |
| An | 0005759 | cellular_component | mitochondrial matrix |
| An | 0046872 | molecular_function | metal ion binding |
| AN | 0003735 | molecular_function | structural constituent of ribosome |
| AN | 0005737 | cellular_component | cytoplasm |
| AN | 0005840 | cellular_component | ribosome |
| AN | 0006412 | biological_process | translation |
| AN | 1990904 | cellular_component | ribonucleoprotein complex |
| Ao | 0005739 | cellular_component | mitochondrion |
| Ao | 0019843 | molecular_function | rRNA binding |
| Ao | 0032543 | biological_process | mitochondrial translation |
| Ao | 0043024 | molecular_function | ribosomal small subunit binding |
| AO | 0003735 | molecular_function | structural constituent of ribosome |
| AO | 0005739 | cellular_component | mitochondrion |
| AO | 0005759 | cellular_component | mitochondrial matrix |
| AO | 0005761 | cellular_component | mitochondrial ribosome |
| AO | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AO | 0005840 | cellular_component | ribosome |
| AO | 0006412 | biological_process | translation |
| AO | 1990904 | cellular_component | ribonucleoprotein complex |
| Ap | 0003735 | molecular_function | structural constituent of ribosome |
| Ap | 0005739 | cellular_component | mitochondrion |
| Ap | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| Ap | 0005840 | cellular_component | ribosome |
| Ap | 0006412 | biological_process | translation |
| Ap | 0032543 | biological_process | mitochondrial translation |
| Ap | 1990904 | cellular_component | ribonucleoprotein complex |
| AP | 0003735 | molecular_function | structural constituent of ribosome |
| AP | 0005840 | cellular_component | ribosome |
| AP | 0006412 | biological_process | translation |
| AQ | 0003723 | molecular_function | RNA binding |
| AQ | 0003735 | molecular_function | structural constituent of ribosome |
| AQ | 0005739 | cellular_component | mitochondrion |
| AQ | 0005743 | cellular_component | mitochondrial inner membrane |
| AQ | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AQ | 0005840 | cellular_component | ribosome |
| AQ | 0006412 | biological_process | translation |
| AQ | 0019843 | molecular_function | rRNA binding |
| AQ | 1990904 | cellular_component | ribonucleoprotein complex |
| AR | 0003735 | molecular_function | structural constituent of ribosome |
| AR | 0005739 | cellular_component | mitochondrion |
| AR | 0005743 | cellular_component | mitochondrial inner membrane |
| AR | 0005763 | cellular_component | mitochondrial small ribosomal subunit |
| AR | 0005840 | cellular_component | ribosome |
| AR | 0006412 | biological_process | translation |
| AR | 0046872 | molecular_function | metal ion binding |
| AR | 0051536 | molecular_function | iron-sulfur cluster binding |
| AR | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
| AR | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| AR | 1990904 | cellular_component | ribonucleoprotein complex |
| AU | 0003735 | molecular_function | structural constituent of ribosome |
| AU | 0005840 | cellular_component | ribosome |
| AU | 0006412 | biological_process | translation |
| AU | 1990904 | cellular_component | ribonucleoprotein complex |
| BC | 0003743 | molecular_function | translation initiation factor activity |
| BC | 0003924 | molecular_function | GTPase activity |
| BC | 0005525 | molecular_function | GTP binding |
| BC | 0006413 | biological_process | translational initiation |
| BT | 0003735 | molecular_function | structural constituent of ribosome |
| BT | 0005739 | cellular_component | mitochondrion |
| BT | 0005840 | cellular_component | ribosome |
| BT | 0006412 | biological_process | translation |
| BT | 0031090 | cellular_component | organelle membrane |
| BT | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 17 |
| Details | binding site for residue GSP BC 901 |
| Chain | Residue |
| BC | ASP190 |
| BC | LYS289 |
| BC | ASP291 |
| BC | SER324 |
| BC | ALA325 |
| BC | LEU326 |
| BC | MG902 |
| BC | NA903 |
| BC | HOH1001 |
| BC | HIS191 |
| BC | GLY192 |
| BC | LYS193 |
| BC | THR194 |
| BC | THR195 |
| BC | THR214 |
| BC | GLY237 |
| BC | ASN288 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue MG BC 902 |
| Chain | Residue |
| BC | THR194 |
| BC | THR214 |
| BC | GSP901 |
| BC | HOH1001 |
| BC | HOH1002 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | binding site for residue NA BC 903 |
| Chain | Residue |
| BC | GLY212 |
| BC | GSP901 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | binding site for residue SPM AA 3001 |
| Chain | Residue |
| AA | U299 |
| AA | G300 |
| AA | U301 |
| AA | U397 |
| AA | G398 |
| AA | A399 |
| AA | C400 |
| AA | A462 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3002 |
| Chain | Residue |
| AA | G232 |
| AA | A235 |
| AA | A236 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3003 |
| Chain | Residue |
| AA | U938 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3004 |
| Chain | Residue |
| AA | A419 |
| AA | A442 |
| AA | U443 |
| site_id | AC8 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3005 |
| Chain | Residue |
| AA | C494 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3006 |
| Chain | Residue |
| AA | A250 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3007 |
| Chain | Residue |
| AA | C422 |
| AA | A434 |
| site_id | AD2 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3008 |
| Chain | Residue |
| AA | A157 |
| AA | C162 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3009 |
| Chain | Residue |
| AA | U28 |
| AA | A184 |
| site_id | AD4 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3010 |
| Chain | Residue |
| AA | A29 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3011 |
| Chain | Residue |
| AA | A925 |
| AA | A926 |
| AA | G931 |
| site_id | AD6 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3012 |
| Chain | Residue |
| AA | G178 |
| site_id | AD7 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3014 |
| Chain | Residue |
| AA | G955 |
| AA | A957 |
| site_id | AD8 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3015 |
| Chain | Residue |
| AA | G444 |
| site_id | AD9 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3016 |
| Chain | Residue |
| AA | U495 |
| site_id | AE1 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3017 |
| Chain | Residue |
| AA | G398 |
| site_id | AE2 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3018 |
| Chain | Residue |
| AA | G381 |
| site_id | AE3 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3019 |
| Chain | Residue |
| AA | A406 |
| site_id | AE4 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3020 |
| Chain | Residue |
| AA | A925 |
| AA | A926 |
| AA | A934 |
| AA | G947 |
| site_id | AE5 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3021 |
| Chain | Residue |
| AA | U302 |
| AA | G398 |
| site_id | AE6 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3022 |
| Chain | Residue |
| AA | G807 |
| site_id | AE7 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3023 |
| Chain | Residue |
| AA | G550 |
| AA | G551 |
| site_id | AE8 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3024 |
| Chain | Residue |
| AA | C171 |
| AA | A172 |
| site_id | AE9 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3026 |
| Chain | Residue |
| AA | A659 |
| site_id | AF1 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3027 |
| Chain | Residue |
| AA | A72 |
| AA | G73 |
| AA | G147 |
| site_id | AF2 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3028 |
| Chain | Residue |
| AA | U112 |
| AA | C497 |
| site_id | AF3 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3029 |
| Chain | Residue |
| AA | A569 |
| AA | U684 |
| site_id | AF4 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3030 |
| Chain | Residue |
| AA | A350 |
| site_id | AF5 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3031 |
| Chain | Residue |
| AA | C584 |
| AA | C585 |
| AA | U586 |
| site_id | AF6 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3032 |
| Chain | Residue |
| AA | U230 |
| AA | G231 |
| site_id | AF7 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3033 |
| Chain | Residue |
| AA | A549 |
| AA | G550 |
| AA | G551 |
| AA | G781 |
| site_id | AF8 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3034 |
| Chain | Residue |
| AA | U614 |
| AA | G682 |
| AA | G683 |
| site_id | AF9 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3035 |
| Chain | Residue |
| AA | C589 |
| AA | U610 |
| AA | G700 |
| site_id | AG1 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3036 |
| Chain | Residue |
| AA | C585 |
| site_id | AG2 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3037 |
| Chain | Residue |
| AA | G845 |
| AA | C846 |
| AX | A4 |
| AX | C5 |
| site_id | AG3 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3038 |
| Chain | Residue |
| AA | U292 |
| AA | A293 |
| AA | A294 |
| AA | A295 |
| site_id | AG4 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3039 |
| Chain | Residue |
| AA | A794 |
| site_id | AG5 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3040 |
| Chain | Residue |
| AA | MG3103 |
| site_id | AG6 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3041 |
| Chain | Residue |
| AA | U932 |
| site_id | AG7 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3042 |
| Chain | Residue |
| AA | U614 |
| AA | G682 |
| site_id | AG8 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3043 |
| Chain | Residue |
| AA | U242 |
| AA | A259 |
| site_id | AG9 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3044 |
| Chain | Residue |
| AA | C576 |
| AA | C577 |
| site_id | AH1 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3046 |
| Chain | Residue |
| AA | A367 |
| AA | A368 |
| AA | A384 |
| site_id | AH2 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3047 |
| Chain | Residue |
| AA | A99 |
| site_id | AH3 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3048 |
| Chain | Residue |
| AA | G762 |
| AN | LYS59 |
| site_id | AH4 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3050 |
| Chain | Residue |
| AA | G190 |
| site_id | AH5 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3051 |
| Chain | Residue |
| AA | C262 |
| site_id | AH6 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3053 |
| Chain | Residue |
| AA | A297 |
| AA | U299 |
| site_id | AH7 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3055 |
| Chain | Residue |
| AA | U70 |
| site_id | AH8 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3056 |
| Chain | Residue |
| AA | G7 |
| AA | U8 |
| AA | G17 |
| AA | G18 |
| site_id | AH9 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3058 |
| Chain | Residue |
| AA | G298 |
| AA | A454 |
| site_id | AI1 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3059 |
| Chain | Residue |
| AA | A630 |
| AA | A654 |
| AA | G655 |
| site_id | AI2 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3060 |
| Chain | Residue |
| AA | A926 |
| AA | G931 |
| AA | A933 |
| AA | A934 |
| site_id | AI3 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3061 |
| Chain | Residue |
| AA | A392 |
| site_id | AI4 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3062 |
| Chain | Residue |
| AA | G836 |
| AA | C837 |
| AA | G956 |
| site_id | AI5 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3063 |
| Chain | Residue |
| AA | C927 |
| AA | A928 |
| AA | G930 |
| AA | A933 |
| site_id | AI6 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3064 |
| Chain | Residue |
| AA | U433 |
| site_id | AI7 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3065 |
| Chain | Residue |
| AA | G17 |
| site_id | AI8 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3066 |
| Chain | Residue |
| AA | U10 |
| AA | G12 |
| site_id | AI9 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3067 |
| Chain | Residue |
| AA | U9 |
| AA | G520 |
| site_id | AJ1 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3068 |
| Chain | Residue |
| AA | C191 |
| AA | U194 |
| AA | G195 |
| AA | U206 |
| site_id | AJ2 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3070 |
| Chain | Residue |
| AA | G323 |
| AA | U447 |
| site_id | AJ3 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3072 |
| Chain | Residue |
| AA | C156 |
| AA | A157 |
| AA | C161 |
| AA | C162 |
| site_id | AJ4 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3073 |
| Chain | Residue |
| AA | U556 |
| AA | G557 |
| AA | U714 |
| AA | G715 |
| site_id | AJ5 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3074 |
| Chain | Residue |
| AA | C417 |
| site_id | AJ6 |
| Number of Residues | 5 |
| Details | binding site for residue MG AA 3075 |
| Chain | Residue |
| AA | G55 |
| AA | U56 |
| AA | G61 |
| AA | C62 |
| Aj | ASN48 |
| site_id | AJ7 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3076 |
| Chain | Residue |
| AA | A420 |
| site_id | AJ8 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3077 |
| Chain | Residue |
| AA | C685 |
| AA | A686 |
| AA | U690 |
| site_id | AJ9 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3078 |
| Chain | Residue |
| AA | A84 |
| site_id | AK1 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3079 |
| Chain | Residue |
| AA | A673 |
| site_id | AK2 |
| Number of Residues | 4 |
| Details | binding site for residue MG AA 3080 |
| Chain | Residue |
| AA | C244 |
| AA | G255 |
| AL | PRO73 |
| AL | ASN74 |
| site_id | AK3 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3081 |
| Chain | Residue |
| AA | U492 |
| site_id | AK4 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3083 |
| Chain | Residue |
| AA | U531 |
| AA | A929 |
| site_id | AK5 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3084 |
| Chain | Residue |
| AA | A297 |
| site_id | AK6 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3085 |
| Chain | Residue |
| AA | G628 |
| AA | A657 |
| site_id | AK7 |
| Number of Residues | 3 |
| Details | binding site for residue MG AA 3086 |
| Chain | Residue |
| AA | A720 |
| AA | G750 |
| AA | A751 |
| site_id | AK8 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3087 |
| Chain | Residue |
| AA | G377 |
| site_id | AK9 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3089 |
| Chain | Residue |
| AA | U664 |
| AA | C667 |
| site_id | AL1 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3090 |
| Chain | Residue |
| AA | A39 |
| site_id | AL2 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3091 |
| Chain | Residue |
| AA | A75 |
| site_id | AL3 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3092 |
| Chain | Residue |
| AA | A569 |
| AA | U570 |
| site_id | AL4 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3095 |
| Chain | Residue |
| AA | G643 |
| site_id | AL5 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3096 |
| Chain | Residue |
| AA | A639 |
| site_id | AL6 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3097 |
| Chain | Residue |
| AA | A218 |
| AA | A274 |
| site_id | AL7 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3099 |
| Chain | Residue |
| AA | A573 |
| site_id | AL8 |
| Number of Residues | 2 |
| Details | binding site for residue MG AA 3101 |
| Chain | Residue |
| AA | A748 |
| AA | C749 |
| site_id | AL9 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3102 |
| Chain | Residue |
| AA | G689 |
| site_id | AM1 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3103 |
| Chain | Residue |
| AA | MG3040 |
| site_id | AM2 |
| Number of Residues | 1 |
| Details | binding site for residue MG AA 3105 |
| Chain | Residue |
| AA | U31 |
| site_id | AM3 |
| Number of Residues | 4 |
| Details | binding site for residue MG AB 301 |
| Chain | Residue |
| AB | HIS92 |
| AB | ASP223 |
| AB | ASP239 |
| AB | ASP240 |
| site_id | AM4 |
| Number of Residues | 4 |
| Details | binding site for residue ZN AR 500 |
| Chain | Residue |
| AF | CYS105 |
| AR | CYS66 |
| AR | CYS69 |
| AR | CYS101 |
| site_id | AM5 |
| Number of Residues | 4 |
| Details | binding site for residue ZN Ac 500 |
| Chain | Residue |
| AP | CYS26 |
| Ac | CYS139 |
| Ac | CYS141 |
| Ac | CYS149 |
| site_id | AM6 |
| Number of Residues | 17 |
| Details | binding site for residue GTP Ag 500 |
| Chain | Residue |
| Ag | HIS66 |
| Ag | MET99 |
| Ag | ARG101 |
| Ag | GLY130 |
| Ag | THR131 |
| Ag | GLY132 |
| Ag | LYS133 |
| Ag | THR134 |
| Ag | LEU135 |
| Ag | THR312 |
| Ag | TYR347 |
| Ag | PRO387 |
| Ag | GLY388 |
| Ag | MG501 |
| Ag | HOH601 |
| Ag | HOH602 |
| Ag | HOH603 |
| site_id | AM7 |
| Number of Residues | 5 |
| Details | binding site for residue MG Ag 501 |
| Chain | Residue |
| Ag | THR134 |
| Ag | GTP500 |
| Ag | HOH601 |
| Ag | HOH602 |
| Ag | HOH603 |
| site_id | AM8 |
| Number of Residues | 1 |
| Details | binding site for residue MG An 201 |
| Chain | Residue |
| An | ASN139 |
| site_id | AM9 |
| Number of Residues | 4 |
| Details | binding site for residue ZN Ap 500 |
| Chain | Residue |
| Ap | CYS94 |
| Ap | CYS105 |
| Ap | CYS108 |
| Ap | CYS143 |
| site_id | AN1 |
| Number of Residues | 11 |
| Details | binding site for Di-nucleotide FME AV 101 and A AV 71 |
| Chain | Residue |
| AV | C70 |
| BC | ALA630 |
| BC | VAL643 |
| BC | GLY645 |
| BC | SER675 |
| BC | LYS677 |
| BC | HIS678 |
| BC | HIS679 |
| BC | ASP691 |
| BC | GLY693 |
| BC | SER695 |
Functional Information from PROSITE/UniProt
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. IkGLtmG.GLeVisitDnTPiPHN |
| Chain | Residue | Details |
| AK | ILE164-ASN186 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAnR |
| Chain | Residue | Details |
| AL | LYS71-ARG78 |
| site_id | PS00057 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S18 Ribosomal protein S18 signature. VDYkn.VqlLsqFISPftGCIygrHI |
| Chain | Residue | Details |
| AR | VAL73-ILE97 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGrsAQagAvrlAmARAL |
| Chain | Residue | Details |
| AI | GLY335-LEU353 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRkrsVrVlvAVGNgk.GaAGfAigkat.ERad.AF |
| Chain | Residue | Details |
| AE | GLY236-PHE268 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VrSLFDARVHLG |
| Chain | Residue | Details |
| AB | VAL80-GLY91 |
| site_id | PS01176 |
| Number of Residues | 23 |
| Details | IF2 Initiation factor 2 signature. GsLtsLKHhKddisiVktGmDCG |
| Chain | Residue | Details |
| BC | GLY671-GLY693 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 170 |
| Details | Domain: {"description":"tr-type G"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 7 |
| Details | Region: {"description":"G1","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Region: {"description":"G2","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 3 |
| Details | Region: {"description":"G3","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 3 |
| Details | Region: {"description":"G4","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Region: {"description":"G5","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 13 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q91YJ5","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q9Y676","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






