6G63

RNase E in complex with sRNA RrpA

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003676	molecular_function	nucleic acid binding
A	0003723	molecular_function	RNA binding
A	0004540	molecular_function	RNA nuclease activity
A	0006396	biological_process	RNA processing
A	0008995	molecular_function	ribonuclease E activity
G	0003676	molecular_function	nucleic acid binding
G	0003723	molecular_function	RNA binding
G	0004540	molecular_function	RNA nuclease activity
G	0006396	biological_process	RNA processing
G	0008995	molecular_function	ribonuclease E activity
L	0003676	molecular_function	nucleic acid binding
L	0003723	molecular_function	RNA binding
L	0004540	molecular_function	RNA nuclease activity
L	0006396	biological_process	RNA processing
L	0008995	molecular_function	ribonuclease E activity
N	0003676	molecular_function	nucleic acid binding
N	0003723	molecular_function	RNA binding
N	0004540	molecular_function	RNA nuclease activity
N	0006396	biological_process	RNA processing
N	0008995	molecular_function	ribonuclease E activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN A 601

Chain	Residue
A	CYS404
A	CYS407
G	CYS404
G	CYS407

---

site_id	AC2
Number of Residues	4
Details	binding site for residue ZN L 601

Chain	Residue
L	CYS404
L	CYS407
N	CYS404
N	CYS407

---

site_id	AC3
Number of Residues	7
Details	binding site for residue U N 601

Chain	Residue
N	ARG142
N	ILE167
N	ARG169
N	THR170
N	ARG223
N	ARG371
N	SER140

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	Region: {"description":"Interaction with RNA 5'-terminal monophosphate"}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	12
Details	Region: {"description":"Required for zinc-mediated homotetramerization and catalytic activity"}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PubMed","id":"16237448","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	8
Details	Binding site: {"evidences":[{"source":"PubMed","id":"15779893","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18682225","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---