6FRM
Crystal Structure of coenzyme F420H2 oxidase (FprA) co-crystallized with 10 mM Tb-Xo4
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0009055 | molecular_function | electron transfer activity |
| A | 0010181 | molecular_function | FMN binding |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0009055 | molecular_function | electron transfer activity |
| B | 0010181 | molecular_function | FMN binding |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0009055 | molecular_function | electron transfer activity |
| C | 0010181 | molecular_function | FMN binding |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0009055 | molecular_function | electron transfer activity |
| D | 0010181 | molecular_function | FMN binding |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0000166 | molecular_function | nucleotide binding |
| E | 0009055 | molecular_function | electron transfer activity |
| E | 0010181 | molecular_function | FMN binding |
| E | 0016491 | molecular_function | oxidoreductase activity |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0000166 | molecular_function | nucleotide binding |
| F | 0009055 | molecular_function | electron transfer activity |
| F | 0010181 | molecular_function | FMN binding |
| F | 0016491 | molecular_function | oxidoreductase activity |
| F | 0046872 | molecular_function | metal ion binding |
| G | 0000166 | molecular_function | nucleotide binding |
| G | 0009055 | molecular_function | electron transfer activity |
| G | 0010181 | molecular_function | FMN binding |
| G | 0016491 | molecular_function | oxidoreductase activity |
| G | 0046872 | molecular_function | metal ion binding |
| H | 0000166 | molecular_function | nucleotide binding |
| H | 0009055 | molecular_function | electron transfer activity |
| H | 0010181 | molecular_function | FMN binding |
| H | 0016491 | molecular_function | oxidoreductase activity |
| H | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 22 |
| Details | binding site for residue FMN A 501 |
| Chain | Residue |
| A | THR266 |
| A | TYR320 |
| A | ASP321 |
| A | SER353 |
| A | MET354 |
| A | GLY355 |
| A | GLY356 |
| A | ASN357 |
| A | GLY358 |
| A | TYR383 |
| A | HOH624 |
| A | MET267 |
| A | HOH626 |
| A | HOH703 |
| D | GLU86 |
| A | HIS268 |
| A | GLY269 |
| A | SER270 |
| A | THR271 |
| A | PRO317 |
| A | THR318 |
| A | ILE319 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | binding site for residue 7MT A 502 |
| Chain | Residue |
| A | GLU113 |
| A | HOH601 |
| A | HOH602 |
| A | HOH673 |
| D | GLY356 |
| D | TYR382 |
| H | ARG399 |
| H | VAL402 |
| H | LYS403 |
| H | GLU406 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue TB A 503 |
| Chain | Residue |
| A | ASP88 |
| A | HIS89 |
| A | ASP171 |
| A | HIS234 |
| A | HOH649 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | binding site for residue CL A 504 |
| Chain | Residue |
| A | ARG399 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | binding site for residue CL A 505 |
| Chain | Residue |
| A | SER121 |
| site_id | AC6 |
| Number of Residues | 22 |
| Details | binding site for residue FMN B 501 |
| Chain | Residue |
| B | THR266 |
| B | MET267 |
| B | HIS268 |
| B | GLY269 |
| B | SER270 |
| B | THR271 |
| B | PRO317 |
| B | THR318 |
| B | ILE319 |
| B | TYR320 |
| B | ASP321 |
| B | SER353 |
| B | MET354 |
| B | GLY355 |
| B | GLY356 |
| B | ASN357 |
| B | GLY358 |
| B | TYR383 |
| B | HOH603 |
| B | HOH621 |
| C | GLU86 |
| C | TRP153 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | binding site for residue TB B 502 |
| Chain | Residue |
| B | GLU86 |
| B | ASP88 |
| B | HIS89 |
| B | ASP171 |
| B | HIS234 |
| B | HOH723 |
| site_id | AC8 |
| Number of Residues | 1 |
| Details | binding site for residue CL B 503 |
| Chain | Residue |
| B | ARG399 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | binding site for residue CL B 504 |
| Chain | Residue |
| B | SER121 |
| B | HOH751 |
| site_id | AD1 |
| Number of Residues | 23 |
| Details | binding site for residue FMN C 501 |
| Chain | Residue |
| B | GLU86 |
| B | TRP153 |
| B | LEU203 |
| C | THR266 |
| C | MET267 |
| C | HIS268 |
| C | GLY269 |
| C | SER270 |
| C | THR271 |
| C | PRO317 |
| C | THR318 |
| C | ILE319 |
| C | TYR320 |
| C | ASP321 |
| C | SER353 |
| C | MET354 |
| C | GLY355 |
| C | GLY356 |
| C | ASN357 |
| C | GLY358 |
| C | TYR383 |
| C | HOH620 |
| C | HOH698 |
| site_id | AD2 |
| Number of Residues | 2 |
| Details | binding site for residue TB C 502 |
| Chain | Residue |
| C | GLU113 |
| C | HOH786 |
| site_id | AD3 |
| Number of Residues | 5 |
| Details | binding site for residue TB C 503 |
| Chain | Residue |
| C | FE504 |
| C | ASP88 |
| C | HIS89 |
| C | ASP171 |
| C | HIS234 |
| site_id | AD4 |
| Number of Residues | 5 |
| Details | binding site for residue FE C 504 |
| Chain | Residue |
| C | HIS84 |
| C | GLU86 |
| C | HIS152 |
| C | ASP171 |
| C | TB503 |
| site_id | AD5 |
| Number of Residues | 1 |
| Details | binding site for residue CL C 505 |
| Chain | Residue |
| C | SER121 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue CL C 506 |
| Chain | Residue |
| C | LYS338 |
| C | ASN340 |
| C | ARG341 |
| site_id | AD7 |
| Number of Residues | 22 |
| Details | binding site for residue FMN D 501 |
| Chain | Residue |
| A | GLU86 |
| A | LEU203 |
| D | THR266 |
| D | MET267 |
| D | HIS268 |
| D | GLY269 |
| D | SER270 |
| D | THR271 |
| D | PRO317 |
| D | THR318 |
| D | ILE319 |
| D | TYR320 |
| D | ASP321 |
| D | SER353 |
| D | MET354 |
| D | GLY355 |
| D | GLY356 |
| D | ASN357 |
| D | GLY358 |
| D | TYR383 |
| D | HOH1504 |
| D | HOH1506 |
| site_id | AD8 |
| Number of Residues | 4 |
| Details | binding site for residue TB D 502 |
| Chain | Residue |
| D | GLU113 |
| D | HOH1597 |
| D | HOH1612 |
| D | HOH1656 |
| site_id | AD9 |
| Number of Residues | 2 |
| Details | binding site for residue TB D 503 |
| Chain | Residue |
| D | ASP321 |
| D | HOH1652 |
| site_id | AE1 |
| Number of Residues | 5 |
| Details | binding site for residue TB D 504 |
| Chain | Residue |
| D | ASP88 |
| D | HIS89 |
| D | ASP171 |
| D | HIS234 |
| D | FE505 |
| site_id | AE2 |
| Number of Residues | 5 |
| Details | binding site for residue FE D 505 |
| Chain | Residue |
| D | HIS84 |
| D | GLU86 |
| D | ASP88 |
| D | ASP171 |
| D | TB504 |
| site_id | AE3 |
| Number of Residues | 1 |
| Details | binding site for residue CL D 506 |
| Chain | Residue |
| D | ARG341 |
| site_id | AE4 |
| Number of Residues | 2 |
| Details | binding site for residue CL D 507 |
| Chain | Residue |
| D | SER121 |
| D | HOH1646 |
| site_id | AE5 |
| Number of Residues | 22 |
| Details | binding site for residue FMN E 501 |
| Chain | Residue |
| E | THR266 |
| E | MET267 |
| E | HIS268 |
| E | GLY269 |
| E | SER270 |
| E | THR271 |
| E | PRO317 |
| E | THR318 |
| E | ILE319 |
| E | TYR320 |
| E | ASP321 |
| E | SER353 |
| E | MET354 |
| E | GLY355 |
| E | GLY356 |
| E | ASN357 |
| E | GLY358 |
| E | TYR383 |
| E | HOH609 |
| E | HOH632 |
| H | GLU86 |
| H | TRP153 |
| site_id | AE6 |
| Number of Residues | 6 |
| Details | binding site for residue TB E 502 |
| Chain | Residue |
| E | GLU86 |
| E | ASP88 |
| E | HIS89 |
| E | ASP171 |
| E | HIS234 |
| E | HOH748 |
| site_id | AE7 |
| Number of Residues | 2 |
| Details | binding site for residue CL E 503 |
| Chain | Residue |
| E | ASN340 |
| E | ARG341 |
| site_id | AE8 |
| Number of Residues | 1 |
| Details | binding site for residue CL E 504 |
| Chain | Residue |
| E | ARG399 |
| site_id | AE9 |
| Number of Residues | 1 |
| Details | binding site for residue CL E 505 |
| Chain | Residue |
| E | SER121 |
| site_id | AF1 |
| Number of Residues | 8 |
| Details | binding site for residue 7MT F 501 |
| Chain | Residue |
| C | ARG399 |
| C | VAL402 |
| C | LYS403 |
| C | GLU406 |
| F | GLU113 |
| F | HOH614 |
| G | GLY356 |
| G | TYR382 |
| site_id | AF2 |
| Number of Residues | 22 |
| Details | binding site for residue FMN F 502 |
| Chain | Residue |
| F | THR266 |
| F | MET267 |
| F | HIS268 |
| F | GLY269 |
| F | SER270 |
| F | THR271 |
| F | PRO317 |
| F | THR318 |
| F | ILE319 |
| F | TYR320 |
| F | ASP321 |
| F | SER353 |
| F | MET354 |
| F | GLY355 |
| F | GLY356 |
| F | ASN357 |
| F | GLY358 |
| F | TYR383 |
| F | HOH607 |
| F | HOH609 |
| G | GLU86 |
| G | TRP153 |
| site_id | AF3 |
| Number of Residues | 6 |
| Details | binding site for residue TB F 503 |
| Chain | Residue |
| F | ASP88 |
| F | HIS89 |
| F | ASP171 |
| F | HIS234 |
| F | HOH731 |
| F | HOH772 |
| site_id | AF4 |
| Number of Residues | 1 |
| Details | binding site for residue CL F 504 |
| Chain | Residue |
| F | ARG399 |
| site_id | AF5 |
| Number of Residues | 1 |
| Details | binding site for residue CL F 505 |
| Chain | Residue |
| F | SER121 |
| site_id | AF6 |
| Number of Residues | 3 |
| Details | binding site for residue CL F 506 |
| Chain | Residue |
| F | LEU344 |
| F | ARG346 |
| F | GLY372 |
| site_id | AF7 |
| Number of Residues | 21 |
| Details | binding site for residue FMN G 501 |
| Chain | Residue |
| F | GLU86 |
| F | LEU203 |
| G | THR266 |
| G | MET267 |
| G | HIS268 |
| G | GLY269 |
| G | SER270 |
| G | THR271 |
| G | PRO317 |
| G | THR318 |
| G | ILE319 |
| G | TYR320 |
| G | ASP321 |
| G | SER353 |
| G | MET354 |
| G | GLY355 |
| G | GLY356 |
| G | ASN357 |
| G | GLY358 |
| G | TYR383 |
| G | HOH610 |
| site_id | AF8 |
| Number of Residues | 2 |
| Details | binding site for residue TB G 502 |
| Chain | Residue |
| G | GLU113 |
| G | HOH715 |
| site_id | AF9 |
| Number of Residues | 5 |
| Details | binding site for residue TB G 503 |
| Chain | Residue |
| G | ASP88 |
| G | HIS89 |
| G | ASP171 |
| G | HIS234 |
| G | FE505 |
| site_id | AG1 |
| Number of Residues | 1 |
| Details | binding site for residue TB G 504 |
| Chain | Residue |
| G | ASP321 |
| site_id | AG2 |
| Number of Residues | 6 |
| Details | binding site for residue FE G 505 |
| Chain | Residue |
| G | HIS84 |
| G | GLU86 |
| G | ASP88 |
| G | HIS152 |
| G | ASP171 |
| G | TB503 |
| site_id | AG3 |
| Number of Residues | 1 |
| Details | binding site for residue CL G 506 |
| Chain | Residue |
| G | SER121 |
| site_id | AG4 |
| Number of Residues | 23 |
| Details | binding site for residue FMN H 501 |
| Chain | Residue |
| E | GLU86 |
| E | LEU203 |
| H | THR266 |
| H | MET267 |
| H | HIS268 |
| H | GLY269 |
| H | SER270 |
| H | THR271 |
| H | PRO317 |
| H | THR318 |
| H | ILE319 |
| H | TYR320 |
| H | ASP321 |
| H | SER353 |
| H | MET354 |
| H | GLY355 |
| H | GLY356 |
| H | ASN357 |
| H | GLY358 |
| H | TYR383 |
| H | HOH604 |
| H | HOH634 |
| H | HOH735 |
| site_id | AG5 |
| Number of Residues | 3 |
| Details | binding site for residue TB H 502 |
| Chain | Residue |
| H | GLU113 |
| H | HOH729 |
| H | HOH817 |
| site_id | AG6 |
| Number of Residues | 6 |
| Details | binding site for residue TB H 503 |
| Chain | Residue |
| H | ASP88 |
| H | HIS89 |
| H | ASP171 |
| H | HIS234 |
| H | FE504 |
| H | HOH769 |
| site_id | AG7 |
| Number of Residues | 5 |
| Details | binding site for residue FE H 504 |
| Chain | Residue |
| H | HIS84 |
| H | GLU86 |
| H | HIS152 |
| H | ASP171 |
| H | TB503 |
| site_id | AG8 |
| Number of Residues | 2 |
| Details | binding site for residue CL H 505 |
| Chain | Residue |
| H | ARG341 |
| H | HOH736 |
| site_id | AG9 |
| Number of Residues | 1 |
| Details | binding site for residue CL H 506 |
| Chain | Residue |
| H | SER121 |
