6FQZ
Plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor NADP+ and in complex with its substrate 6-phosphogluconate
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0004616 | molecular_function | phosphogluconate dehydrogenase (decarboxylating) activity |
| A | 0005829 | cellular_component | cytosol |
| A | 0006098 | biological_process | pentose-phosphate shunt |
| A | 0009051 | biological_process | pentose-phosphate shunt, oxidative branch |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0019521 | biological_process | D-gluconate metabolic process |
| A | 0046177 | biological_process | D-gluconate catabolic process |
| A | 0050661 | molecular_function | NADP binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0004616 | molecular_function | phosphogluconate dehydrogenase (decarboxylating) activity |
| B | 0005829 | cellular_component | cytosol |
| B | 0006098 | biological_process | pentose-phosphate shunt |
| B | 0009051 | biological_process | pentose-phosphate shunt, oxidative branch |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0019521 | biological_process | D-gluconate metabolic process |
| B | 0046177 | biological_process | D-gluconate catabolic process |
| B | 0050661 | molecular_function | NADP binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 21 |
| Details | binding site for residue 6PG A 501 |
| Chain | Residue |
| A | ASN102 |
| A | ALA259 |
| A | LYS260 |
| A | ARG287 |
| A | ILE367 |
| A | HOH609 |
| A | HOH615 |
| A | HOH617 |
| A | HOH679 |
| A | HOH685 |
| B | ARG447 |
| A | SER128 |
| B | PHE450 |
| B | HIS453 |
| A | GLY129 |
| A | GLY130 |
| A | LYS182 |
| A | HIS185 |
| A | ASN186 |
| A | GLU189 |
| A | TYR190 |
| site_id | AC2 |
| Number of Residues | 9 |
| Details | binding site for residue GOL A 502 |
| Chain | Residue |
| A | MET267 |
| A | THR271 |
| A | ILE275 |
| A | PRO276 |
| A | CYS277 |
| B | MET267 |
| B | LEU284 |
| B | ASP285 |
| B | ASN288 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 503 |
| Chain | Residue |
| A | ILE188 |
| A | CYS277 |
| A | THR279 |
| A | MET280 |
| A | SER334 |
| A | GLN337 |
| A | GLY338 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 504 |
| Chain | Residue |
| A | GLN444 |
| A | ARG447 |
| A | HIS453 |
| A | THR454 |
| A | HOH619 |
| A | HOH655 |
| B | LYS260 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 505 |
| Chain | Residue |
| A | TYR455 |
| A | ARG457 |
| A | TYR464 |
| A | THR466 |
| A | GOL510 |
| B | ASP243 |
| B | LEU244 |
| site_id | AC6 |
| Number of Residues | 9 |
| Details | binding site for residue GOL A 506 |
| Chain | Residue |
| A | CYS281 |
| A | ASP285 |
| A | ASN288 |
| B | ALA270 |
| B | THR271 |
| B | ILE275 |
| B | PRO276 |
| B | CYS277 |
| B | CYS281 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | binding site for residue GOL A 507 |
| Chain | Residue |
| A | THR414 |
| A | ILE418 |
| A | PRO419 |
| A | ILE420 |
| A | SER424 |
| B | VAL410 |
| B | ALA428 |
| B | GLN431 |
| B | HOH604 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 508 |
| Chain | Residue |
| A | TRP104 |
| A | TRP265 |
| B | GLU272 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | binding site for residue GOL A 509 |
| Chain | Residue |
| A | TRP468 |
| A | HOH671 |
| B | ARG460 |
| B | GLU461 |
| site_id | AD1 |
| Number of Residues | 5 |
| Details | binding site for residue GOL A 510 |
| Chain | Residue |
| A | THR466 |
| A | LEU467 |
| A | GOL505 |
| B | LYS240 |
| B | ASP243 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 511 |
| Chain | Residue |
| A | ASN31 |
| A | ARG32 |
| A | ASN83 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue PEG A 512 |
| Chain | Residue |
| A | GLY261 |
| A | LYS264 |
| site_id | AD4 |
| Number of Residues | 8 |
| Details | binding site for residue PEG A 513 |
| Chain | Residue |
| A | CYS281 |
| A | ALA282 |
| A | ASP285 |
| A | PRO421 |
| A | SER424 |
| B | CYS281 |
| B | ASP285 |
| B | ALA425 |
| site_id | AD5 |
| Number of Residues | 21 |
| Details | binding site for residue 6PG B 501 |
| Chain | Residue |
| B | SER128 |
| B | GLY129 |
| B | GLY130 |
| B | LYS182 |
| B | HIS185 |
| B | ASN186 |
| B | GLU189 |
| B | TYR190 |
| B | ALA259 |
| B | LYS260 |
| B | ARG287 |
| B | ILE367 |
| B | HOH627 |
| B | HOH650 |
| B | HOH678 |
| B | HOH695 |
| A | ARG447 |
| A | PHE450 |
| A | HIS453 |
| A | HOH689 |
| B | ASN102 |
| site_id | AD6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL B 502 |
| Chain | Residue |
| A | ALA428 |
| A | GLN431 |
| B | ALA413 |
| B | THR414 |
| B | ILE418 |
| B | ILE420 |
| B | SER424 |
| site_id | AD7 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 503 |
| Chain | Residue |
| B | CYS277 |
| B | MET280 |
| B | SER334 |
| B | GLN337 |
| B | GLY338 |
| site_id | AD8 |
| Number of Residues | 9 |
| Details | binding site for residue GOL B 504 |
| Chain | Residue |
| A | ASN437 |
| A | LEU438 |
| B | TYR200 |
| B | VAL201 |
| B | LYS204 |
| B | HIS205 |
| B | HOH609 |
| B | HOH636 |
| B | HOH704 |
| site_id | AD9 |
| Number of Residues | 7 |
| Details | binding site for residue GOL B 505 |
| Chain | Residue |
| A | ASP243 |
| A | LEU244 |
| B | TYR455 |
| B | ARG457 |
| B | THR466 |
| B | HOH640 |
| B | HOH693 |
| site_id | AE1 |
| Number of Residues | 6 |
| Details | binding site for residue GOL B 506 |
| Chain | Residue |
| A | HOH667 |
| B | GLN444 |
| B | ARG447 |
| B | HIS453 |
| B | THR454 |
| B | HOH653 |
| site_id | AE2 |
| Number of Residues | 4 |
| Details | binding site for residue GOL B 507 |
| Chain | Residue |
| A | TYR449 |
| B | GLU232 |
| B | ARG369 |
| B | GLU461 |
| site_id | AE3 |
| Number of Residues | 5 |
| Details | binding site for residue GOL B 508 |
| Chain | Residue |
| A | GLU300 |
| B | SER435 |
| B | GLN436 |
| B | ASN437 |
| B | HOH617 |
| site_id | AE4 |
| Number of Residues | 6 |
| Details | binding site for residue GOL B 509 |
| Chain | Residue |
| B | TYR171 |
| B | ILE172 |
| B | GLY173 |
| B | TRP351 |
| B | LYS352 |
| B | HOH652 |
| site_id | AE5 |
| Number of Residues | 6 |
| Details | binding site for residue GOL B 510 |
| Chain | Residue |
| A | ASP243 |
| A | LEU244 |
| B | SER22 |
| B | GLU47 |
| B | LEU49 |
| B | ARG135 |
| site_id | AE6 |
| Number of Residues | 3 |
| Details | binding site for residue PGE B 511 |
| Chain | Residue |
| B | ALA259 |
| B | LYS264 |
| B | TRP265 |
| site_id | AE7 |
| Number of Residues | 4 |
| Details | binding site for residue PEG B 512 |
| Chain | Residue |
| B | GLY462 |
| B | ASN463 |
| B | TYR464 |
| B | HIS465 |
| site_id | AE8 |
| Number of Residues | 2 |
| Details | binding site for residue PEG B 513 |
| Chain | Residue |
| A | THR33 |
| B | HOH605 |
