Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6F5S

Crystal Structure of KDM4D with tetrazole ligand GF049

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS238
AHIS244
ACYS310
ACYS312

site_idAC2
Number of Residues2
Detailsbinding site for residue CL A 402
ChainResidue
AASN128
ALYS186

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO A 403
ChainResidue
AHOH627
AGLN76
ALYS91
AARG332

site_idAC4
Number of Residues4
Detailsbinding site for residue EDO A 404
ChainResidue
AHIS115
AASN117
APHE118
AHOH526

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 405
ChainResidue
AARG263
AILE264
ATHR265
AHOH642

site_idAC6
Number of Residues4
Detailsbinding site for residue EDO A 406
ChainResidue
AGLU218
AHIS219
AARG222
AHOH663

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO A 407
ChainResidue
APHE28
AASN29
APHE31
AGLN151
ATRP152
AHOH501

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 A 408
ChainResidue
AARG102
AHIS103
AASN106
AHOH503
AHOH513
AHOH516

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 A 409
ChainResidue
AASN65
AILE66
ASER67
AARG102
AHOH542

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 A 410
ChainResidue
AARG123
ALYS124
ALYS127
AASN128

site_idAD2
Number of Residues5
Detailsbinding site for residue NI A 411
ChainResidue
AHIS192
AGLU194
AHIS280
ACQT412
AHOH553

site_idAD3
Number of Residues15
Detailsbinding site for residue CQT A 412
ChainResidue
AASP139
ATYR179
ATYR181
APHE189
AHIS192
AGLU194
AASP195
ALYS210
ALYS245
AHIS280
ATHR318
ANI411
AHOH553
AHOH698
AHOH763

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:B2RXH2
ChainResidueDetails
ATYR136
AASN202
ALYS210
ALYS245

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00538, ECO:0000305|PubMed:26741168
ChainResidueDetails
AHIS192
AGLU194
AHIS280

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0007744|PDB:5F5A, ECO:0007744|PDB:5F5C
ChainResidueDetails
ACYS238
AHIS244
ACYS310
ACYS312

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: PolyADP-ribosyl glutamic acid => ECO:0000269|PubMed:23102699
ChainResidueDetails
AGLU26
AGLU27

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon