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6EZF

PDE2 in complex with molecule 5

Functional Information from GO Data
ChainGOidnamespacecontents
A0004114molecular_function3',5'-cyclic-nucleotide phosphodiesterase activity
A0007165biological_processsignal transduction
A0008081molecular_functionphosphoric diester hydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 1001
ChainResidue
AASP697
AHOH1131
AHOH1181
AHOH1216
AHOH1275
AHOH1376

site_idAC2
Number of Residues6
Detailsbinding site for residue ZN A 1002
ChainResidue
AASP808
AHOH1181
AHOH1302
AHIS660
AHIS696
AASP697

site_idAC3
Number of Residues9
Detailsbinding site for residue C6Z A 1003
ChainResidue
AALA717
AGLN812
AILE826
ATYR827
APHE830
AMET847
AGLN859
APHE862
AHOH1105

site_idAC4
Number of Residues9
Detailsbinding site for residue GOL A 1004
ChainResidue
ATYR719
ALEU774
APHE777
AHIS865
APRO869
ATHR903
AARG905
AHOH1121
AHOH1130

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL A 1005
ChainResidue
AGLU864
ALEU907
ASER909
AHOH1111
AHOH1121
AHOH1192
AHOH1303

site_idAC6
Number of Residues8
Detailsbinding site for residue SO4 A 1006
ChainResidue
ATHR606
AGLY815
ATHR818
AHOH1101
AHOH1106
AHOH1197
AHOH1231
AHOH1244

site_idAC7
Number of Residues3
Detailsbinding site for residue NA A 1007
ChainResidue
AHIS656
AHOH1302
AHOH1376

Functional Information from PROSITE/UniProt
site_idPS00126
Number of Residues12
DetailsPDEASE_I_1 3'5'-cyclic nucleotide phosphodiesterase domain signature. HDLdHrGtnNsF
ChainResidueDetails
AHIS696-PHE707

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"UniProtKB","id":"O76083","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15938621","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19828435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23899287","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1Z1L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3IBJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ITM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ITU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4HTX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4HTZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4JIB","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15938621","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19828435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23899287","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1Z1L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ITM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ITU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4HTX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4HTZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4JIB","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

242842

PDB entries from 2025-10-08

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