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6ETU

Crystal structure of KDM4D with tetrazolhydrazide compound 7

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS238
AHIS244
ACYS310
ACYS312

site_idAC2
Number of Residues3
Detailsbinding site for residue CL A 402
ChainResidue
AASN128
ALYS186
AHOH833

site_idAC3
Number of Residues6
Detailsbinding site for residue NA A 403
ChainResidue
AHOH635
AHOH708
AHOH846
AHOH846
AASN17
AASN262

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 404
ChainResidue
AARG123
ALYS124
ALYS127
AASN128
AHOH827

site_idAC5
Number of Residues7
Detailsbinding site for residue EDO A 405
ChainResidue
ALYS150
AGLN151
ATRP152
AASN153
AHIS156
AHOH614
AHOH680

site_idAC6
Number of Residues5
Detailsbinding site for residue EDO A 406
ChainResidue
APRO251
ATHR252
ALYS255
AARG263
AHOH783

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO A 407
ChainResidue
ATYR179
ATYR181
AGLU194
ASER200
AASN294
ABWZ411

site_idAC8
Number of Residues8
Detailsbinding site for residue EDO A 408
ChainResidue
AMET19
AILE20
ALYS255
AHOH506
AHOH534
AHOH576
AHOH579
AHOH877

site_idAC9
Number of Residues9
Detailsbinding site for residue SO4 A 409
ChainResidue
AARG60
AGLU61
ATHR62
AASP64
AASN65
AHOH508
AHOH522
AHOH647
AHOH835

site_idAD1
Number of Residues5
Detailsbinding site for residue NI A 410
ChainResidue
AHIS192
AGLU194
AHIS280
ABWZ411
AHOH712

site_idAD2
Number of Residues13
Detailsbinding site for residue BWZ A 411
ChainResidue
ATYR181
APHE189
AHIS192
AGLU194
ASER200
AASN202
ALYS210
AHIS280
AASN284
AEDO407
ANI410
AHOH646
AHOH712

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:B2RXH2
ChainResidueDetails
ATYR136
AASN202
ALYS210
ALYS245

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00538, ECO:0000305|PubMed:26741168
ChainResidueDetails
AHIS192
AGLU194
AHIS280

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0007744|PDB:5F5A, ECO:0007744|PDB:5F5C
ChainResidueDetails
ACYS238
AHIS244
ACYS310
ACYS312

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: PolyADP-ribosyl glutamic acid => ECO:0000269|PubMed:23102699
ChainResidueDetails
AGLU26
AGLU27

223532

PDB entries from 2024-08-07

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