6ETU
Crystal structure of KDM4D with tetrazolhydrazide compound 7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 71.999, 71.999, 150.872 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.239 - 1.330 |
R-factor | 0.1235 |
Rwork | 0.123 |
R-free | 0.15400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ets |
RMSD bond length | 0.027 |
RMSD bond angle | 2.260 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.239 | 48.239 | 1.410 |
High resolution limit [Å] | 1.330 | 3.970 | 1.330 |
Rmerge | 0.054 | 0.021 | 0.733 |
Rmeas | 0.059 | 0.022 | 0.799 |
Total number of observations | 1187218 | ||
Number of reflections | 174441 | 6545 | 28048 |
<I/σ(I)> | 20.06 | 75.16 | 2.42 |
Completeness [%] | 99.7 | 99.9 | 99.2 |
Redundancy | 6.806 | 6.954 | 6.34 |
CC(1/2) | 1.000 | 1.000 | 0.771 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 293 | 100mM HEPES, 180mM ammonium sulphate, 24% PEG 3350 |