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6ERK

Crystal structure of diaminopelargonic acid aminotransferase from Psychrobacter cryohalolentis

Functional Information from GO Data
ChainGOidnamespacecontents
A0004015molecular_functionadenosylmethionine-8-amino-7-oxononanoate transaminase activity
A0005737cellular_componentcytoplasm
A0008483molecular_functiontransaminase activity
A0009102biological_processbiotin biosynthetic process
A0030170molecular_functionpyridoxal phosphate binding
B0004015molecular_functionadenosylmethionine-8-amino-7-oxononanoate transaminase activity
B0005737cellular_componentcytoplasm
B0008483molecular_functiontransaminase activity
B0009102biological_processbiotin biosynthetic process
B0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 A 501
ChainResidue
ATYR332
AASP333
AARG337
AHOH632
AHOH638

site_idAC2
Number of Residues6
Detailsbinding site for residue EDO A 502
ChainResidue
BPHE9
BHOH807
ALYS94
AHOH767
BASN7
BASP8

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL A 503
ChainResidue
AARG337
AVAL406
AHOH605
AHOH639
AHOH838

site_idAC4
Number of Residues14
Detailsbinding site for residue PLP A 504
ChainResidue
AGLY113
ASER114
ATYR146
ATYR147
AGLU213
AASP247
AILE249
AALA250
ALYS276
AHOH618
AHOH749
BTHR311
BHOH603
BHOH608

site_idAC5
Number of Residues22
Detailsbinding site for Di-peptide PLP B 501 and LYS B 276
ChainResidue
ATHR311
AHOH633
BTRP53
BALA55
BGLY113
BSER114
BTYR146
BTYR147
BGLY148
BASP247
BILE249
BALA250
BGLY275
BALA277
BLEU278
BTHR279
BGLY281
BHOH618
BHOH619
BHOH662
BHOH763
BHOH799

Functional Information from PROSITE/UniProt
site_idPS00600
Number of Residues38
DetailsAA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. LIaDEIat.GFgRsGklfacehaaisp....DIMtiGKaltGG
ChainResidueDetails
ALEU244-GLY281

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PDB entries from 2024-09-11

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