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6EE2

X-ray crystal structure of Pf-M17 in complex with inhibitor 6i and regulatory zinc ion

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0006508biological_processproteolysis
A0019538biological_processprotein metabolic process
A0030145molecular_functionmanganese ion binding
A0046872molecular_functionmetal ion binding
A0070006molecular_functionmetalloaminopeptidase activity
B0005737cellular_componentcytoplasm
B0006508biological_processproteolysis
B0019538biological_processprotein metabolic process
B0030145molecular_functionmanganese ion binding
B0046872molecular_functionmetal ion binding
B0070006molecular_functionmetalloaminopeptidase activity
C0005737cellular_componentcytoplasm
C0006508biological_processproteolysis
C0019538biological_processprotein metabolic process
C0030145molecular_functionmanganese ion binding
C0046872molecular_functionmetal ion binding
C0070006molecular_functionmetalloaminopeptidase activity
D0005737cellular_componentcytoplasm
D0006508biological_processproteolysis
D0019538biological_processprotein metabolic process
D0030145molecular_functionmanganese ion binding
D0046872molecular_functionmetal ion binding
D0070006molecular_functionmetalloaminopeptidase activity
E0005737cellular_componentcytoplasm
E0006508biological_processproteolysis
E0019538biological_processprotein metabolic process
E0030145molecular_functionmanganese ion binding
E0046872molecular_functionmetal ion binding
E0070006molecular_functionmetalloaminopeptidase activity
F0005737cellular_componentcytoplasm
F0006508biological_processproteolysis
F0019538biological_processprotein metabolic process
F0030145molecular_functionmanganese ion binding
F0046872molecular_functionmetal ion binding
F0070006molecular_functionmetalloaminopeptidase activity
G0005737cellular_componentcytoplasm
G0006508biological_processproteolysis
G0019538biological_processprotein metabolic process
G0030145molecular_functionmanganese ion binding
G0046872molecular_functionmetal ion binding
G0070006molecular_functionmetalloaminopeptidase activity
H0005737cellular_componentcytoplasm
H0006508biological_processproteolysis
H0019538biological_processprotein metabolic process
H0030145molecular_functionmanganese ion binding
H0046872molecular_functionmetal ion binding
H0070006molecular_functionmetalloaminopeptidase activity
I0005737cellular_componentcytoplasm
I0006508biological_processproteolysis
I0019538biological_processprotein metabolic process
I0030145molecular_functionmanganese ion binding
I0046872molecular_functionmetal ion binding
I0070006molecular_functionmetalloaminopeptidase activity
J0005737cellular_componentcytoplasm
J0006508biological_processproteolysis
J0019538biological_processprotein metabolic process
J0030145molecular_functionmanganese ion binding
J0046872molecular_functionmetal ion binding
J0070006molecular_functionmetalloaminopeptidase activity
K0005737cellular_componentcytoplasm
K0006508biological_processproteolysis
K0019538biological_processprotein metabolic process
K0030145molecular_functionmanganese ion binding
K0046872molecular_functionmetal ion binding
K0070006molecular_functionmetalloaminopeptidase activity
L0005737cellular_componentcytoplasm
L0006508biological_processproteolysis
L0019538biological_processprotein metabolic process
L0030145molecular_functionmanganese ion binding
L0046872molecular_functionmetal ion binding
L0070006molecular_functionmetalloaminopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue CO3 A 701
ChainResidue
ALYS374
AALA460
AGLY462
AARG463
ALEU487
AJ1V703

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 702
ChainResidue
AJ1V703
AASP379
AASP459
AGLU461

site_idAC3
Number of Residues18
Detailsbinding site for residue J1V A 703
ChainResidue
ALYS374
AASP379
ALYS386
AGLY390
AMET392
AASP399
AASP459
AALA460
AGLU461
ALEU487
ATHR488
AGLY489
ALEU492
AALA577
APHE583
ACO3701
AZN702
AHOH812

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 A 704
ChainResidue
AGLU102
ATYR103
AASN104
A1PE707
AHOH905

site_idAC5
Number of Residues6
Detailsbinding site for residue SO4 A 705
ChainResidue
ALYS111
AHOH811
GGLU125
GGLY126
GSER220
JLYS164

site_idAC6
Number of Residues5
Detailsbinding site for residue 1PE A 706
ChainResidue
ATYR103
AASN104
ALEU321
ATYR411
AHOH1000

site_idAC7
Number of Residues3
Detailsbinding site for residue 1PE A 707
ChainResidue
AGLU316
ALYS320
ASO4704

site_idAC8
Number of Residues7
Detailsbinding site for residue SO4 A 708
ChainResidue
ASER435
ALYS436
BSER435
BLYS436
BHOH975
CSER435
CLYS436

site_idAC9
Number of Residues6
Detailsbinding site for residue DMS A 709
ChainResidue
ALEU214
AHIS215
AASP216
AASN217
ATYR246
AGLU262

site_idAD1
Number of Residues5
Detailsbinding site for residue DMS A 710
ChainResidue
AGLY126
ALEU219
ASER220
AHOH806
GLYS111

site_idAD2
Number of Residues4
Detailsbinding site for residue SO4 A 711
ChainResidue
ALEU492
APHE583
FLYS552
FHOH969

site_idAD3
Number of Residues5
Detailsbinding site for residue SO4 A 712
ChainResidue
AARG586
AHOH885
CASN545
CSER549
CHOH911

site_idAD4
Number of Residues6
Detailsbinding site for residue CO3 B 701
ChainResidue
BLYS374
BALA460
BGLY462
BARG463
BLEU487
BJ1V703

site_idAD5
Number of Residues4
Detailsbinding site for residue ZN B 702
ChainResidue
BASP379
BASP459
BGLU461
BJ1V703

site_idAD6
Number of Residues20
Detailsbinding site for residue J1V B 703
ChainResidue
BCO3701
BZN702
BHOH823
BHOH876
BHOH939
BLYS374
BASP379
BLYS386
BGLY390
BMET392
BASP399
BASN457
BASP459
BGLU461
BLEU487
BTHR488
BGLY489
BLEU492
BALA577
BPHE583

site_idAD7
Number of Residues5
Detailsbinding site for residue 1PE B 704
ChainResidue
BTYR103
BHIS108
BLYS320
BTYR411
B1PE705

site_idAD8
Number of Residues5
Detailsbinding site for residue 1PE B 705
ChainResidue
BTYR103
BGLU316
BLYS320
B1PE704
H1PE704

site_idAD9
Number of Residues5
Detailsbinding site for residue DMS B 706
ChainResidue
BASN506
BASN568
BTHR569
BALA570
BHOH1015

site_idAE1
Number of Residues6
Detailsbinding site for residue SO4 B 707
ChainResidue
BPHE156
BASN161
BLYS164
FTYR176
FPHE178
FSER184

site_idAE2
Number of Residues6
Detailsbinding site for residue CO3 C 701
ChainResidue
CLYS374
CALA460
CGLY462
CARG463
CLEU487
CJ1V703

site_idAE3
Number of Residues4
Detailsbinding site for residue ZN C 702
ChainResidue
CASP379
CASP459
CGLU461
CJ1V703

site_idAE4
Number of Residues18
Detailsbinding site for residue J1V C 703
ChainResidue
CLYS374
CASP379
CLYS386
CGLY390
CMET392
CASP399
CASN457
CASP459
CGLU461
CLEU487
CTHR488
CGLY489
CLEU492
CALA577
CPHE583
CCO3701
CZN702
CHOH853

site_idAE5
Number of Residues5
Detailsbinding site for residue 1PE C 704
ChainResidue
CTYR103
CGLU316
CLYS320
C1PE705
CHOH973

site_idAE6
Number of Residues5
Detailsbinding site for residue 1PE C 705
ChainResidue
CTYR103
CASN104
CHIS108
CTYR411
C1PE704

site_idAE7
Number of Residues7
Detailsbinding site for residue DMS C 706
ChainResidue
CLEU214
CHIS215
CASP216
CASN217
CTYR246
CMET261
CGLU262

site_idAE8
Number of Residues5
Detailsbinding site for residue SO4 C 707
ChainResidue
CPHE156
CASN161
CLYS164
ETYR176
ESER184

site_idAE9
Number of Residues6
Detailsbinding site for residue CO3 D 701
ChainResidue
DLYS374
DALA460
DGLY462
DARG463
DLEU487
DJ1V703

site_idAF1
Number of Residues4
Detailsbinding site for residue ZN D 702
ChainResidue
DASP379
DASP459
DGLU461
DJ1V703

site_idAF2
Number of Residues17
Detailsbinding site for residue J1V D 703
ChainResidue
DLYS374
DASP379
DLYS386
DGLY390
DMET392
DASP399
DASP459
DGLU461
DLEU487
DTHR488
DGLY489
DLEU492
DALA577
DPHE583
DCO3701
DZN702
DHOH889

site_idAF3
Number of Residues3
Detailsbinding site for residue SO4 D 704
ChainResidue
DTYR103
DASN104
D1PE708

site_idAF4
Number of Residues6
Detailsbinding site for residue SO4 D 705
ChainResidue
DSER435
DLYS436
ESER435
ELYS436
FSER435
FLYS436

site_idAF5
Number of Residues4
Detailsbinding site for residue 1PE D 706
ChainResidue
DTYR103
DASN104
DHIS108
DTYR411

site_idAF6
Number of Residues5
Detailsbinding site for residue 1PE D 707
ChainResidue
DASN449
DLYS451
DASP543
DGLN567
ESER254

site_idAF7
Number of Residues4
Detailsbinding site for residue 1PE D 708
ChainResidue
DTYR103
DGLU316
DLYS320
DSO4704

site_idAF8
Number of Residues4
Detailsbinding site for residue 1PE D 709
ChainResidue
DASN505
DASN506
DTHR569
DALA570

site_idAF9
Number of Residues4
Detailsbinding site for residue DMS D 710
ChainResidue
DSER86
DGLU87
DVAL88
DTHR97

site_idAG1
Number of Residues6
Detailsbinding site for residue CO3 E 701
ChainResidue
ELYS374
EALA460
EGLY462
EARG463
ELEU487
EJ1V703

site_idAG2
Number of Residues4
Detailsbinding site for residue ZN E 702
ChainResidue
EASP379
EASP459
EGLU461
EJ1V703

site_idAG3
Number of Residues20
Detailsbinding site for residue J1V E 703
ChainResidue
ELYS374
EASP379
ELYS386
EGLY390
EMET392
EASP399
EASN457
EASP459
EGLU461
ELEU487
ETHR488
EGLY489
ELEU492
EALA577
EPHE583
ECO3701
EZN702
EHOH823
EHOH873
EHOH904

site_idAG4
Number of Residues3
Detailsbinding site for residue 1PE E 704
ChainResidue
ETYR103
EGLU316
ELYS320

site_idAG5
Number of Residues7
Detailsbinding site for residue 1PE E 705
ChainResidue
ETYR103
EASN104
EPHE289
ELYS320
ETYR411
EHOH837
EHOH907

site_idAG6
Number of Residues5
Detailsbinding site for residue 1PE E 706
ChainResidue
EASN449
ELYS451
EASP543
EGLU564
FSER254

site_idAG7
Number of Residues5
Detailsbinding site for residue DMS E 707
ChainResidue
EASN505
EASN506
EASN568
ETHR569
EALA570

site_idAG8
Number of Residues6
Detailsbinding site for residue SO4 E 708
ChainResidue
ESER86
EGLU87
EVAL88
ETHR97
EASN312
EHOH885

site_idAG9
Number of Residues2
Detailsbinding site for residue SO4 E 709
ChainResidue
EGLU324
ETYR325

site_idAH1
Number of Residues6
Detailsbinding site for residue CO3 F 701
ChainResidue
FLYS374
FALA460
FGLY462
FARG463
FLEU487
FJ1V703

site_idAH2
Number of Residues4
Detailsbinding site for residue ZN F 702
ChainResidue
FASP379
FASP459
FGLU461
FJ1V703

site_idAH3
Number of Residues19
Detailsbinding site for residue J1V F 703
ChainResidue
FLYS374
FASP379
FLYS386
FGLY390
FMET392
FLEU395
FASP399
FASN457
FASP459
FGLU461
FLEU487
FTHR488
FGLY489
FLEU492
FALA577
FPHE583
FCO3701
FZN702
FHOH839

site_idAH4
Number of Residues4
Detailsbinding site for residue SO4 F 704
ChainResidue
FGLU102
FTYR103
FASN104
F1PE706

site_idAH5
Number of Residues7
Detailsbinding site for residue 1PE F 705
ChainResidue
FTYR103
FASN104
FHIS108
FPHE289
FLYS320
FTYR411
FHOH863

site_idAH6
Number of Residues6
Detailsbinding site for residue 1PE F 706
ChainResidue
FTYR103
FASN104
FGLU316
FLYS320
FSO4704
FHOH982

site_idAH7
Number of Residues6
Detailsbinding site for residue 1PE F 707
ChainResidue
DSER254
FASN449
FLYS451
FASP543
FGLN567
FHOH818

site_idAH8
Number of Residues6
Detailsbinding site for residue CO3 G 701
ChainResidue
GLYS374
GALA460
GGLY462
GARG463
GLEU487
GJ1V703

site_idAH9
Number of Residues5
Detailsbinding site for residue ZN G 702
ChainResidue
GASP379
GLYS386
GASP459
GGLU461
GJ1V703

site_idAI1
Number of Residues19
Detailsbinding site for residue J1V G 703
ChainResidue
GLYS374
GASP379
GLYS386
GGLY390
GMET392
GLEU395
GASP399
GASP459
GGLU461
GLEU487
GTHR488
GGLY489
GLEU492
GALA577
GPHE583
GCO3701
GZN702
GHOH840
LSO4710

site_idAI2
Number of Residues7
Detailsbinding site for residue SO4 G 704
ChainResidue
GSER435
GLYS436
GHOH830
HSER435
HLYS436
ISER435
ILYS436

site_idAI3
Number of Residues5
Detailsbinding site for residue SO4 G 705
ChainResidue
GGLU102
GTYR103
GASN104
G1PE709
GHOH1026

site_idAI4
Number of Residues4
Detailsbinding site for residue 1PE G 706
ChainResidue
GTYR103
GASN104
GHIS108
GTYR411

site_idAI5
Number of Residues9
Detailsbinding site for residue 1PE G 707
ChainResidue
ATYR115
AASN122
AGLU124
ATYR270
GTYR115
GASN122
GGLU124
GTYR270
G1PE708

site_idAI6
Number of Residues3
Detailsbinding site for residue 1PE G 708
ChainResidue
AASN122
GASN122
G1PE707

site_idAI7
Number of Residues6
Detailsbinding site for residue 1PE G 709
ChainResidue
EGLU124
GTYR103
GASN104
GGLU316
GLYS320
GSO4705

site_idAI8
Number of Residues7
Detailsbinding site for residue DMS G 710
ChainResidue
GTYR244
GASP249
GTYR292
GSER295
GLYS587
GHOH997
ITYR541

site_idAI9
Number of Residues6
Detailsbinding site for residue SO4 G 711
ChainResidue
GASN545
GSER549
GHOH849
GHOH910
GHOH949
HARG586

site_idAJ1
Number of Residues6
Detailsbinding site for residue CO3 H 701
ChainResidue
HLYS374
HALA460
HGLY462
HARG463
HLEU487
HJ1V703

site_idAJ2
Number of Residues4
Detailsbinding site for residue ZN H 702
ChainResidue
HASP379
HASP459
HGLU461
HJ1V703

site_idAJ3
Number of Residues19
Detailsbinding site for residue J1V H 703
ChainResidue
HLYS374
HASP379
HLYS386
HGLY390
HMET392
HASP399
HASN457
HASP459
HGLU461
HLEU487
HTHR488
HGLY489
HLEU492
HALA577
HPHE583
HCO3701
HZN702
HHOH805
HHOH982

site_idAJ4
Number of Residues6
Detailsbinding site for residue 1PE H 704
ChainResidue
B1PE705
HTYR103
HHIS108
HLYS320
HLEU321
HTYR411

site_idAJ5
Number of Residues3
Detailsbinding site for residue 1PE H 705
ChainResidue
HTYR103
HGLU316
HLYS320

site_idAJ6
Number of Residues4
Detailsbinding site for residue ZN I 701
ChainResidue
IASP379
IASP459
IGLU461
IJ1V703

site_idAJ7
Number of Residues6
Detailsbinding site for residue CO3 I 702
ChainResidue
ILYS374
IALA460
IGLY462
IARG463
ILEU487
IJ1V703

site_idAJ8
Number of Residues17
Detailsbinding site for residue J1V I 703
ChainResidue
ILYS374
IASP379
ILYS386
IGLY390
IMET392
IASP399
IASP459
IGLU461
ILEU487
ITHR488
IGLY489
IALA577
IPHE583
IZN701
ICO3702
IHOH832
IHOH1029

site_idAJ9
Number of Residues5
Detailsbinding site for residue 1PE I 704
ChainResidue
ITYR103
IGLU316
ILYS320
I1PE705
ISO4710

site_idAK1
Number of Residues6
Detailsbinding site for residue 1PE I 705
ChainResidue
ITYR103
IASN104
IHIS108
IPHE289
ITYR411
I1PE704

site_idAK2
Number of Residues6
Detailsbinding site for residue 1PE I 706
ChainResidue
ITYR115
IGLY119
IGLY120
IASN122
IASN149
ITYR270

site_idAK3
Number of Residues4
Detailsbinding site for residue EDO I 707
ChainResidue
IASN506
ITHR569
IALA570
IHOH856

site_idAK4
Number of Residues3
Detailsbinding site for residue EDO I 708
ChainResidue
IGLY126
ILEU219
ISER220

site_idAK5
Number of Residues5
Detailsbinding site for residue SO4 I 709
ChainResidue
HASN545
HSER549
HHOH892
HHOH895
IARG586

site_idAK6
Number of Residues5
Detailsbinding site for residue SO4 I 710
ChainResidue
IILE101
IGLU102
ITYR103
IASN104
I1PE704

site_idAK7
Number of Residues6
Detailsbinding site for residue CO3 J 701
ChainResidue
JLYS374
JALA460
JGLY462
JARG463
JLEU487
JJ1V703

site_idAK8
Number of Residues4
Detailsbinding site for residue ZN J 702
ChainResidue
JASP379
JASP459
JGLU461
JJ1V703

site_idAK9
Number of Residues18
Detailsbinding site for residue J1V J 703
ChainResidue
JLYS374
JASP379
JLYS386
JGLY390
JMET392
JASP399
JASP459
JGLU461
JLEU487
JTHR488
JGLY489
JLEU492
JALA577
JPHE583
JCO3701
JZN702
JHOH812
JHOH886

site_idAL1
Number of Residues3
Detailsbinding site for residue 1PE J 704
ChainResidue
JASP95
JPRO96
JTHR97

site_idAL2
Number of Residues3
Detailsbinding site for residue 1PE J 705
ChainResidue
JTYR103
JHIS108
JTYR411

site_idAL3
Number of Residues3
Detailsbinding site for residue 1PE J 706
ChainResidue
JTYR103
JGLU316
JLYS320

site_idAL4
Number of Residues6
Detailsbinding site for residue DMS J 707
ChainResidue
GPHE156
GASN161
GLYS164
GPHE165
JMET177
JSER184

site_idAL5
Number of Residues6
Detailsbinding site for residue CO3 K 701
ChainResidue
KLYS374
KALA460
KGLY462
KARG463
KLEU487
KJ1V703

site_idAL6
Number of Residues4
Detailsbinding site for residue ZN K 702
ChainResidue
KASP379
KASP459
KGLU461
KJ1V703

site_idAL7
Number of Residues18
Detailsbinding site for residue J1V K 703
ChainResidue
KLYS374
KASP379
KLYS386
KGLY390
KMET392
KASP399
KASN457
KASP459
KGLU461
KLEU487
KTHR488
KGLY489
KLEU492
KALA577
KPHE583
KCO3701
KZN702
KHOH856

site_idAL8
Number of Residues4
Detailsbinding site for residue SO4 K 704
ChainResidue
KILE101
KTYR103
KASN104
KHOH1029

site_idAL9
Number of Residues4
Detailsbinding site for residue 1PE K 705
ChainResidue
KTYR103
KGLU316
KGLN319
KLYS320

site_idAM1
Number of Residues6
Detailsbinding site for residue 1PE K 706
ChainResidue
KTYR103
KASN104
KHIS108
KLYS320
KTYR411
KHOH1021

site_idAM2
Number of Residues6
Detailsbinding site for residue 1PE K 707
ChainResidue
KASN449
KLYS451
KASP543
KGLU564
KGLN567
LSER254

site_idAM3
Number of Residues3
Detailsbinding site for residue 1PE K 708
ChainResidue
KASP95
KPRO96
KHOH1130

site_idAM4
Number of Residues8
Detailsbinding site for residue DMS K 709
ChainResidue
KASN545
KSER549
KHOH832
KHOH865
KHOH943
LARG586
LHOH1078
LHOH1096

site_idAM5
Number of Residues7
Detailsbinding site for residue SO4 K 710
ChainResidue
IPHE156
IASN161
ILYS164
IPHE165
KTYR176
KMET177
KSER184

site_idAM6
Number of Residues6
Detailsbinding site for residue SO4 K 711
ChainResidue
JSER435
JLYS436
KSER435
KLYS436
LSER435
LLYS436

site_idAM7
Number of Residues5
Detailsbinding site for residue 1PE L 701
ChainResidue
GTRP526
GHOH990
LASN511
LTRP526
LHOH1004

site_idAM8
Number of Residues7
Detailsbinding site for residue CO3 L 702
ChainResidue
LLYS374
LALA460
LGLU461
LGLY462
LARG463
LLEU487
LJ1V704

site_idAM9
Number of Residues4
Detailsbinding site for residue ZN L 703
ChainResidue
LASP379
LASP459
LGLU461
LJ1V704

site_idAN1
Number of Residues20
Detailsbinding site for residue J1V L 704
ChainResidue
LLYS374
LASP379
LLYS386
LGLY390
LMET392
LLEU395
LASP399
LASN457
LASP459
LGLU461
LLEU487
LTHR488
LGLY489
LLEU492
LALA577
LPHE583
LCO3702
LZN703
LHOH807
LHOH812

site_idAN2
Number of Residues5
Detailsbinding site for residue SO4 L 705
ChainResidue
LILE101
LGLU102
LTYR103
LASN104
L1PE708

site_idAN3
Number of Residues5
Detailsbinding site for residue 1PE L 706
ChainResidue
LTYR103
LASN104
LLYS320
LTYR411
LHOH876

site_idAN4
Number of Residues6
Detailsbinding site for residue 1PE L 707
ChainResidue
JSER254
LASN449
LLYS451
LASP543
LGLN567
LHOH803

site_idAN5
Number of Residues4
Detailsbinding site for residue 1PE L 708
ChainResidue
LTYR103
LGLU316
LLYS320
LSO4705

site_idAN6
Number of Residues10
Detailsbinding site for residue 1PE L 709
ChainResidue
JALA387
JHOH904
LASN384
LLEU385
LALA387
LALA388
LSER391
LASN457
LHOH813
LHOH879

site_idAN7
Number of Residues4
Detailsbinding site for residue SO4 L 710
ChainResidue
GPHE583
GJ1V703
LLYS552
LHOH901

site_idAN8
Number of Residues5
Detailsbinding site for residue SO4 L 711
ChainResidue
GTYR499
LILE529
LILE530
LASN531
LHOH995

Functional Information from PROSITE/UniProt
site_idPS00631
Number of Residues8
DetailsCYTOSOL_AP Cytosol aminopeptidase signature. NTDAEGRL
ChainResidueDetails
AASN457-LEU464

226262

PDB entries from 2024-10-16

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