6E7B
13-pf 3-start GMPCPP-human alpha1B/beta3 microtubules
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0000226 | biological_process | microtubule cytoskeleton organization |
A | 0000278 | biological_process | mitotic cell cycle |
A | 0003725 | molecular_function | double-stranded RNA binding |
A | 0003924 | molecular_function | GTPase activity |
A | 0005198 | molecular_function | structural molecule activity |
A | 0005200 | molecular_function | structural constituent of cytoskeleton |
A | 0005515 | molecular_function | protein binding |
A | 0005525 | molecular_function | GTP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005856 | cellular_component | cytoskeleton |
A | 0005874 | cellular_component | microtubule |
A | 0005881 | cellular_component | cytoplasmic microtubule |
A | 0005929 | cellular_component | cilium |
A | 0007017 | biological_process | microtubule-based process |
A | 0015630 | cellular_component | microtubule cytoskeleton |
A | 0016787 | molecular_function | hydrolase activity |
A | 0030705 | biological_process | cytoskeleton-dependent intracellular transport |
A | 0031625 | molecular_function | ubiquitin protein ligase binding |
A | 0051301 | biological_process | cell division |
A | 0071353 | biological_process | cellular response to interleukin-4 |
B | 0000166 | molecular_function | nucleotide binding |
B | 0000226 | biological_process | microtubule cytoskeleton organization |
B | 0000278 | biological_process | mitotic cell cycle |
B | 0003924 | molecular_function | GTPase activity |
B | 0005200 | molecular_function | structural constituent of cytoskeleton |
B | 0005515 | molecular_function | protein binding |
B | 0005525 | molecular_function | GTP binding |
B | 0005634 | cellular_component | nucleus |
B | 0005737 | cellular_component | cytoplasm |
B | 0005856 | cellular_component | cytoskeleton |
B | 0005874 | cellular_component | microtubule |
B | 0007017 | biological_process | microtubule-based process |
B | 0007411 | biological_process | axon guidance |
B | 0015630 | cellular_component | microtubule cytoskeleton |
B | 0030027 | cellular_component | lamellipodium |
B | 0030175 | cellular_component | filopodium |
B | 0030182 | biological_process | neuron differentiation |
B | 0030424 | cellular_component | axon |
B | 0030425 | cellular_component | dendrite |
B | 0030426 | cellular_component | growth cone |
B | 0038007 | biological_process | netrin-activated signaling pathway |
B | 0042277 | molecular_function | peptide binding |
B | 0042995 | cellular_component | cell projection |
B | 0043025 | cellular_component | neuronal cell body |
B | 0045171 | cellular_component | intercellular bridge |
B | 0046872 | molecular_function | metal ion binding |
B | 0070062 | cellular_component | extracellular exosome |
B | 0071944 | cellular_component | cell periphery |
B | 0072686 | cellular_component | mitotic spindle |
B | 1990791 | biological_process | dorsal root ganglion development |
B | 1990890 | molecular_function | netrin receptor binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | binding site for residue MG B 501 |
Chain | Residue |
B | GLY96 |
B | THR143 |
B | G2P502 |
site_id | AC2 |
Number of Residues | 17 |
Details | binding site for residue G2P B 502 |
Chain | Residue |
B | ASN99 |
B | SER138 |
B | GLY141 |
B | GLY142 |
B | THR143 |
B | ASP177 |
B | ASN204 |
B | TYR222 |
B | LEU225 |
B | ASN226 |
B | MG501 |
B | GLY10 |
B | GLN11 |
B | CYS12 |
B | GLN15 |
B | GLY96 |
B | GLY98 |
site_id | AC3 |
Number of Residues | 2 |
Details | binding site for residue MG A 501 |
Chain | Residue |
A | GLU71 |
A | GTP502 |
site_id | AC4 |
Number of Residues | 22 |
Details | binding site for residue GTP A 502 |
Chain | Residue |
A | GLY10 |
A | GLN11 |
A | ALA12 |
A | GLN15 |
A | ASP69 |
A | GLU71 |
A | ASP98 |
A | ALA99 |
A | ALA100 |
A | ASN101 |
A | SER140 |
A | GLY142 |
A | GLY144 |
A | THR145 |
A | ILE171 |
A | THR179 |
A | GLU183 |
A | ASN206 |
A | TYR224 |
A | ASN228 |
A | MG501 |
B | LYS252 |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 3 |
Details | Motif: {"description":"MREI motif","evidences":[{"source":"UniProtKB","id":"P07437","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 15 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"38609661","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8VT7","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 6 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34996871","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"35482892","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7SJ7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7Z6S","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P68363","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34996871","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"7SJ7","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine; by CDK1","evidences":[{"source":"PubMed","id":"16371510","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 3 |
Details | Motif: {"description":"MREC motif","evidences":[{"source":"PubMed","id":"31727855","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | Active site: {"evidences":[{"source":"PubMed","id":"34996871","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 8 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"34996871","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"35482892","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"38609661","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7SJ7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"7Z6S","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"8VT7","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAR-2009","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V.","Waridel P.","Quadroni M."]}}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 1 |
Details | Modified residue: {"description":"3'-nitrotyrosine","evidences":[{"source":"UniProtKB","id":"P68373","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAR-2009","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V.","Waridel P.","Quadroni M."]}}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 3 |
Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)"} |
Chain | Residue | Details |