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6E47

Crystal Structure of the Murine Norovirus VP1 P domain in complex with the CD300lf Receptor and Glycochenodeoxycholic Acid

Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 601
ChainResidue
AASP366
AASP410
AHOH702
AHOH782
AHOH788
AHOH826

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 602
ChainResidue
AHOH709
AHOH725
AHOH799
AGLN438
AASP440
AHOH708

site_idAC3
Number of Residues6
Detailsbinding site for residue EDO A 603
ChainResidue
APRO259
APRO262
AGLN263
AASP403
AHOH738
AHOH794

site_idAC4
Number of Residues2
Detailsbinding site for residue EDO A 604
ChainResidue
AGLN371
GARG81

site_idAC5
Number of Residues6
Detailsbinding site for residue EDO A 605
ChainResidue
AASP403
AALA448
AILE449
AASP450
AHOH771
AHOH828

site_idAC6
Number of Residues7
Detailsbinding site for residue EDO A 606
ChainResidue
ATYR295
ALYS296
APHE297
AGLU303
ASER383
AASP385
ALEU386

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO A 607
ChainResidue
AALA444
AALA446
BGLU342
BCHO602
BEDO607

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 608
ChainResidue
AGLU456
ASER459
BGLU456
BSER459

site_idAC9
Number of Residues12
Detailsbinding site for residue CHO B 601
ChainResidue
AGLN312
AGLY314
AGLN340
AARG390
AARG392
AHOH705
BTRP245
BALA247
BTYR250
BTYR435
BARG437
BHOH702

site_idAD1
Number of Residues13
Detailsbinding site for residue CHO B 602
ChainResidue
ATRP245
AALA247
ATYR435
AARG437
AEDO607
BALA290
BGLN312
BGLY314
BGLN340
BARG390
BARG392
BHOH703
BHOH715

site_idAD2
Number of Residues6
Detailsbinding site for residue MG B 603
ChainResidue
BASP366
BASP410
BHOH721
BHOH727
BHOH792
BHOH802

site_idAD3
Number of Residues6
Detailsbinding site for residue MG B 604
ChainResidue
BGLN438
BASP440
BHOH705
BHOH707
BHOH731
BHOH783

site_idAD4
Number of Residues2
Detailsbinding site for residue EDO B 605
ChainResidue
BASP440
BHOH740

site_idAD5
Number of Residues6
Detailsbinding site for residue EDO B 606
ChainResidue
BTYR295
BPHE297
BGLU303
BSER383
BASP385
BLEU386

site_idAD6
Number of Residues8
Detailsbinding site for residue EDO B 607
ChainResidue
AEDO607
BTYR295
BGLN340
BTHR341
BVAL387
BARG390
BVAL391
BHOH754

site_idAD7
Number of Residues4
Detailsbinding site for residue EDO B 608
ChainResidue
BPRO406
BTYR408
BLEU412
FGLN15

site_idAD8
Number of Residues4
Detailsbinding site for residue EDO B 609
ChainResidue
BASP403
BALA448
BILE449
BASP450

site_idAD9
Number of Residues6
Detailsbinding site for residue MG F 201
ChainResidue
AASN364
AASP366
AHOH842
FLYS94
FGLY96
FASP98

site_idAE1
Number of Residues5
Detailsbinding site for residue EDO F 202
ChainResidue
AASN364
FTHR46
FGLU49
FTHR93
FASP98

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO F 203
ChainResidue
BSER502
BGLY503
FARG65
FHOH302
FHOH309

site_idAE3
Number of Residues2
Detailsbinding site for residue EDO F 204
ChainResidue
FGLY27
FTYR31

site_idAE4
Number of Residues3
Detailsbinding site for residue EDO F 205
ChainResidue
FTYR31
FLYS32
FTHR93

site_idAE5
Number of Residues2
Detailsbinding site for residue EDO F 206
ChainResidue
FLYS94
FLEU97

site_idAE6
Number of Residues4
Detailsbinding site for residue EDO F 207
ChainResidue
AASN364
FCYS44
FTHR46
FHOH320

site_idAE7
Number of Residues4
Detailsbinding site for residue EDO F 208
ChainResidue
BGLY426
BGLU427
BVAL428
BTYR501

site_idAE8
Number of Residues6
Detailsbinding site for residue MG G 201
ChainResidue
BASN364
BASP366
GLYS94
GGLY96
GASP98
GHOH332

site_idAE9
Number of Residues3
Detailsbinding site for residue EDO G 202
ChainResidue
GGLY27
GTRP28
GHOH313

site_idAF1
Number of Residues6
Detailsbinding site for residue EDO G 203
ChainResidue
BASN364
GTHR46
GGLU49
GTHR93
GASP98
GHOH332

site_idAF2
Number of Residues2
Detailsbinding site for residue EDO G 204
ChainResidue
GVAL105
GASN106

221716

PDB entries from 2024-06-26

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