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6DS5

Cryo EM structure of human SEIPIN

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005543molecular_functionphospholipid binding
A0005783cellular_componentendoplasmic reticulum
A0005789cellular_componentendoplasmic reticulum membrane
A0005811cellular_componentlipid droplet
A0016020cellular_componentmembrane
A0016042biological_processlipid catabolic process
A0019915biological_processlipid storage
A0034389biological_processlipid droplet organization
A0045444biological_processfat cell differentiation
A0050995biological_processnegative regulation of lipid catabolic process
A0120162biological_processpositive regulation of cold-induced thermogenesis
A0140042biological_processlipid droplet formation
B0005515molecular_functionprotein binding
B0005543molecular_functionphospholipid binding
B0005783cellular_componentendoplasmic reticulum
B0005789cellular_componentendoplasmic reticulum membrane
B0005811cellular_componentlipid droplet
B0016020cellular_componentmembrane
B0016042biological_processlipid catabolic process
B0019915biological_processlipid storage
B0034389biological_processlipid droplet organization
B0045444biological_processfat cell differentiation
B0050995biological_processnegative regulation of lipid catabolic process
B0120162biological_processpositive regulation of cold-induced thermogenesis
B0140042biological_processlipid droplet formation
C0005515molecular_functionprotein binding
C0005543molecular_functionphospholipid binding
C0005783cellular_componentendoplasmic reticulum
C0005789cellular_componentendoplasmic reticulum membrane
C0005811cellular_componentlipid droplet
C0016020cellular_componentmembrane
C0016042biological_processlipid catabolic process
C0019915biological_processlipid storage
C0034389biological_processlipid droplet organization
C0045444biological_processfat cell differentiation
C0050995biological_processnegative regulation of lipid catabolic process
C0120162biological_processpositive regulation of cold-induced thermogenesis
C0140042biological_processlipid droplet formation
D0005515molecular_functionprotein binding
D0005543molecular_functionphospholipid binding
D0005783cellular_componentendoplasmic reticulum
D0005789cellular_componentendoplasmic reticulum membrane
D0005811cellular_componentlipid droplet
D0016020cellular_componentmembrane
D0016042biological_processlipid catabolic process
D0019915biological_processlipid storage
D0034389biological_processlipid droplet organization
D0045444biological_processfat cell differentiation
D0050995biological_processnegative regulation of lipid catabolic process
D0120162biological_processpositive regulation of cold-induced thermogenesis
D0140042biological_processlipid droplet formation
E0005515molecular_functionprotein binding
E0005543molecular_functionphospholipid binding
E0005783cellular_componentendoplasmic reticulum
E0005789cellular_componentendoplasmic reticulum membrane
E0005811cellular_componentlipid droplet
E0016020cellular_componentmembrane
E0016042biological_processlipid catabolic process
E0019915biological_processlipid storage
E0034389biological_processlipid droplet organization
E0045444biological_processfat cell differentiation
E0050995biological_processnegative regulation of lipid catabolic process
E0120162biological_processpositive regulation of cold-induced thermogenesis
E0140042biological_processlipid droplet formation
F0005515molecular_functionprotein binding
F0005543molecular_functionphospholipid binding
F0005783cellular_componentendoplasmic reticulum
F0005789cellular_componentendoplasmic reticulum membrane
F0005811cellular_componentlipid droplet
F0016020cellular_componentmembrane
F0016042biological_processlipid catabolic process
F0019915biological_processlipid storage
F0034389biological_processlipid droplet organization
F0045444biological_processfat cell differentiation
F0050995biological_processnegative regulation of lipid catabolic process
F0120162biological_processpositive regulation of cold-induced thermogenesis
F0140042biological_processlipid droplet formation
G0005515molecular_functionprotein binding
G0005543molecular_functionphospholipid binding
G0005783cellular_componentendoplasmic reticulum
G0005789cellular_componentendoplasmic reticulum membrane
G0005811cellular_componentlipid droplet
G0016020cellular_componentmembrane
G0016042biological_processlipid catabolic process
G0019915biological_processlipid storage
G0034389biological_processlipid droplet organization
G0045444biological_processfat cell differentiation
G0050995biological_processnegative regulation of lipid catabolic process
G0120162biological_processpositive regulation of cold-induced thermogenesis
G0140042biological_processlipid droplet formation
H0005515molecular_functionprotein binding
H0005543molecular_functionphospholipid binding
H0005783cellular_componentendoplasmic reticulum
H0005789cellular_componentendoplasmic reticulum membrane
H0005811cellular_componentlipid droplet
H0016020cellular_componentmembrane
H0016042biological_processlipid catabolic process
H0019915biological_processlipid storage
H0034389biological_processlipid droplet organization
H0045444biological_processfat cell differentiation
H0050995biological_processnegative regulation of lipid catabolic process
H0120162biological_processpositive regulation of cold-induced thermogenesis
H0140042biological_processlipid droplet formation
I0005515molecular_functionprotein binding
I0005543molecular_functionphospholipid binding
I0005783cellular_componentendoplasmic reticulum
I0005789cellular_componentendoplasmic reticulum membrane
I0005811cellular_componentlipid droplet
I0016020cellular_componentmembrane
I0016042biological_processlipid catabolic process
I0019915biological_processlipid storage
I0034389biological_processlipid droplet organization
I0045444biological_processfat cell differentiation
I0050995biological_processnegative regulation of lipid catabolic process
I0120162biological_processpositive regulation of cold-induced thermogenesis
I0140042biological_processlipid droplet formation
J0005515molecular_functionprotein binding
J0005543molecular_functionphospholipid binding
J0005783cellular_componentendoplasmic reticulum
J0005789cellular_componentendoplasmic reticulum membrane
J0005811cellular_componentlipid droplet
J0016020cellular_componentmembrane
J0016042biological_processlipid catabolic process
J0019915biological_processlipid storage
J0034389biological_processlipid droplet organization
J0045444biological_processfat cell differentiation
J0050995biological_processnegative regulation of lipid catabolic process
J0120162biological_processpositive regulation of cold-induced thermogenesis
J0140042biological_processlipid droplet formation
K0005515molecular_functionprotein binding
K0005543molecular_functionphospholipid binding
K0005783cellular_componentendoplasmic reticulum
K0005789cellular_componentendoplasmic reticulum membrane
K0005811cellular_componentlipid droplet
K0016020cellular_componentmembrane
K0016042biological_processlipid catabolic process
K0019915biological_processlipid storage
K0034389biological_processlipid droplet organization
K0045444biological_processfat cell differentiation
K0050995biological_processnegative regulation of lipid catabolic process
K0120162biological_processpositive regulation of cold-induced thermogenesis
K0140042biological_processlipid droplet formation
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues220
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
ALEU179-ILE199
JLEU179-ILE199
KLEU179-ILE199
BLEU179-ILE199
CLEU179-ILE199
DLEU179-ILE199
ELEU179-ILE199
FLEU179-ILE199
GLEU179-ILE199
HLEU179-ILE199
ILEU179-ILE199

site_idSWS_FT_FI2
Number of Residues1474
DetailsTOPO_DOM: Cytoplasmic => ECO:0000255
ChainResidueDetails
AILE200-PRO334
JILE200-PRO334
KILE200-PRO334
BILE200-PRO334
CILE200-PRO334
DILE200-PRO334
EILE200-PRO334
FILE200-PRO334
GILE200-PRO334
HILE200-PRO334
IILE200-PRO334

site_idSWS_FT_FI3
Number of Residues22
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:24275569
ChainResidueDetails
ATYR225
ETHR308
FTYR225
FTHR308
GTYR225
GTHR308
HTYR225
HTHR308
ITYR225
ITHR308
JTYR225
ATHR308
JTHR308
KTYR225
KTHR308
BTYR225
BTHR308
CTYR225
CTHR308
DTYR225
DTHR308
ETYR225

site_idSWS_FT_FI4
Number of Residues22
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q5FVJ6
ChainResidueDetails
ALYS282
EARG287
FLYS282
FARG287
GLYS282
GARG287
HLYS282
HARG287
ILYS282
IARG287
JLYS282
AARG287
JARG287
KLYS282
KARG287
BLYS282
BARG287
CLYS282
CARG287
DLYS282
DARG287
ELYS282

site_idSWS_FT_FI5
Number of Residues11
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:14981520
ChainResidueDetails
AALA24
JALA24
KALA24
BALA24
CALA24
DALA24
EALA24
FALA24
GALA24
HALA24
IALA24

site_idSWS_FT_FI6
Number of Residues11
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
ALEU178
JLEU178
KLEU178
BLEU178
CLEU178
DLEU178
ELEU178
FLEU178
GLEU178
HLEU178
ILEU178

225399

PDB entries from 2024-09-25

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