6DS1
Crystal structure of Cj0485 dehydrogenase in complex with NADP+
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
B | 0000166 | molecular_function | nucleotide binding |
B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
C | 0000166 | molecular_function | nucleotide binding |
C | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
D | 0000166 | molecular_function | nucleotide binding |
D | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 30 |
Details | binding site for residue NAP A 301 |
Chain | Residue |
A | GLY14 |
A | ASN89 |
A | ALA90 |
A | GLY91 |
A | ASN112 |
A | TYR117 |
A | ILE138 |
A | VAL139 |
A | SER140 |
A | TYR153 |
A | LYS157 |
A | LYS17 |
A | PRO183 |
A | ALA184 |
A | GLU185 |
A | VAL186 |
A | LEU190 |
A | HOH407 |
A | HOH413 |
A | HOH418 |
A | HOH424 |
A | HOH441 |
A | GLY18 |
A | HOH467 |
A | ILE19 |
A | SER38 |
A | ARG39 |
A | ILE61 |
A | ASP62 |
A | LEU63 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue GOL A 302 |
Chain | Residue |
A | ASN7 |
A | VAL9 |
A | HIS80 |
A | GLY82 |
A | TYR84 |
A | GLU131 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue MG A 303 |
Chain | Residue |
A | ILE61 |
A | ASP62 |
A | ASN65 |
B | GLN68 |
site_id | AC4 |
Number of Residues | 32 |
Details | binding site for residue NAP B 301 |
Chain | Residue |
B | GLY14 |
B | LYS17 |
B | GLY18 |
B | ILE19 |
B | SER38 |
B | ARG39 |
B | SER40 |
B | ILE61 |
B | ASP62 |
B | LEU63 |
B | ASN89 |
B | ALA90 |
B | GLY91 |
B | ASN112 |
B | TYR117 |
B | ILE138 |
B | VAL139 |
B | SER140 |
B | TYR153 |
B | LYS157 |
B | PRO183 |
B | ALA184 |
B | GLU185 |
B | VAL186 |
B | LEU190 |
B | HOH405 |
B | HOH406 |
B | HOH420 |
B | HOH426 |
B | HOH427 |
B | HOH473 |
B | HOH488 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue MG B 302 |
Chain | Residue |
A | GLN68 |
B | ILE61 |
B | ASP62 |
B | ASN65 |
site_id | AC6 |
Number of Residues | 31 |
Details | binding site for residue NAP C 301 |
Chain | Residue |
C | LEU190 |
C | HOH413 |
C | HOH417 |
C | HOH418 |
C | HOH421 |
C | HOH446 |
C | HOH456 |
C | HOH465 |
C | GLY14 |
C | LYS17 |
C | GLY18 |
C | ILE19 |
C | SER38 |
C | ARG39 |
C | SER40 |
C | ILE61 |
C | ASP62 |
C | LEU63 |
C | ASN89 |
C | ALA90 |
C | GLY91 |
C | ASN112 |
C | TYR117 |
C | ILE138 |
C | VAL139 |
C | SER140 |
C | TYR153 |
C | LYS157 |
C | PRO183 |
C | ALA184 |
C | VAL186 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue MG C 302 |
Chain | Residue |
C | ILE61 |
C | ASP62 |
C | ASN65 |
D | GLN68 |
site_id | AC8 |
Number of Residues | 32 |
Details | binding site for residue NAP D 301 |
Chain | Residue |
D | GLY14 |
D | LYS17 |
D | GLY18 |
D | ILE19 |
D | SER38 |
D | ARG39 |
D | SER40 |
D | ILE61 |
D | ASP62 |
D | LEU63 |
D | ASN89 |
D | ALA90 |
D | GLY91 |
D | ASN112 |
D | TYR117 |
D | ILE138 |
D | VAL139 |
D | SER140 |
D | TYR153 |
D | LYS157 |
D | PRO183 |
D | ALA184 |
D | VAL186 |
D | LEU190 |
D | TYR191 |
D | HOH401 |
D | HOH404 |
D | HOH409 |
D | HOH438 |
D | HOH450 |
D | HOH455 |
D | HOH462 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue GOL D 302 |
Chain | Residue |
A | GLU99 |
A | HOH479 |
D | GLU70 |
D | LYS122 |
D | GLU123 |
D | HOH425 |
site_id | AD1 |
Number of Residues | 6 |
Details | binding site for residue GOL D 303 |
Chain | Residue |
D | ASN7 |
D | LYS8 |
D | VAL9 |
D | GLY82 |
D | TYR84 |
D | GLU131 |
site_id | AD2 |
Number of Residues | 3 |
Details | binding site for residue MG D 304 |
Chain | Residue |
C | GLN68 |
D | ASP62 |
D | ASN65 |