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6DP8

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Li+ for 240 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH310
AHOH328
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue LI A 202
ChainResidue
bC5
AASP71
AGLU109
AASP132
BU4

site_idAC3
Number of Residues2
Detailsbinding site for residue CL A 203
ChainResidue
ATYR83
AGOL212

site_idAC4
Number of Residues1
Detailsbinding site for residue CL A 204
ChainResidue
AHOH365

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 205
ChainResidue
AILE64
AHOH430
AHOH464

site_idAC6
Number of Residues9
Detailsbinding site for residue GOL A 206
ChainResidue
AHIS115
AARG118
ATYR119
AARG123
AGLU167
AASN170
AHOH351
AHOH366
AHOH369

site_idAC7
Number of Residues6
Detailsbinding site for residue GOL A 207
ChainResidue
AGLY76
AASN77
BA1
CDG2
CDA3
bG6

site_idAC8
Number of Residues3
Detailsbinding site for residue EDO A 208
ChainResidue
ALYS143
ATHR173
ATYR174

site_idAC9
Number of Residues5
Detailsbinding site for residue PEG A 209
ChainResidue
AVAL150
AASN152
AGLU154
AHOH403
CHOH103

site_idAD1
Number of Residues9
Detailsbinding site for residue PEG A 210
ChainResidue
AILE63
ATRP65
AVAL150
AARG151
ATRP181
ATRP186
ALYS190
AHOH315
AHOH414

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 211
ChainResidue
AARG97
ALEU157
ALEU161
ATHR173
AHOH387

site_idAD3
Number of Residues9
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
AARG118
ACL203
AHOH304
AHOH306
AHOH341
AHOH351
AHOH367
AHOH387

site_idAD4
Number of Residues5
Detailsbinding site for residue EDO A 213
ChainResidue
AGLU66
ALEU94
ALYS127
AHOH329
AHOH371

site_idAD5
Number of Residues5
Detailsbinding site for residue EDO A 214
ChainResidue
ATHR148
AHOH307
AHOH357
CDT4
CDG5

site_idAD6
Number of Residues7
Detailsbinding site for residue EDO A 215
ChainResidue
ASER147
ATHR148
ALEU149
AVAL150
AARG151
AHOH388
AHOH420

site_idAD7
Number of Residues3
Detailsbinding site for residue EDO B 101
ChainResidue
AARG195
BA1
bG6

site_idAD8
Number of Residues6
Detailsbinding site for residue MG b 101
ChainResidue
AHOH340
bC5
bG6
bHOH201
bHOH205
bHOH207

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

226707

PDB entries from 2024-10-30

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