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6DP5

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 40 mM Mg2+ and 75 mM K+ for 40 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH301
AHOH308
AHOH331
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues8
Detailsbinding site for residue K A 203
ChainResidue
AASP192
AGLY194
AARG195
ALYS196
AHOH301
AHOH330
bC5
bG6

site_idAC4
Number of Residues7
Detailsbinding site for residue K A 204
ChainResidue
AASP132
AGLU188
AHOH303
AHOH331
BU4
BHOH105
bC5

site_idAC5
Number of Residues1
Detailsbinding site for residue IOD A 205
ChainResidue
ATYR83

site_idAC6
Number of Residues3
Detailsbinding site for residue IOD A 207
ChainResidue
AILE64
AHOH398
AHOH421

site_idAC7
Number of Residues6
Detailsbinding site for residue GOL A 209
ChainResidue
AGLY76
AASN77
APRO78
AHOH315
CDG2
CDA3

site_idAC8
Number of Residues5
Detailsbinding site for residue GOL A 210
ChainResidue
AVAL150
AASN152
AGLU154
AHOH353
CHOH202

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO A 211
ChainResidue
AGLU66
ATYR119
ASER125
ALYS127

site_idAD1
Number of Residues6
Detailsbinding site for residue EDO A 212
ChainResidue
AHIS115
AGLU122
AARG123
AGLU167
AHOH335
AHOH388

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 213
ChainResidue
ALYS143
ATHR173
ATYR174

site_idAD3
Number of Residues6
Detailsbinding site for residue EDO A 214
ChainResidue
AARG97
ALEU157
ALEU161
ATHR173
AHOH306
AHOH349

site_idAD4
Number of Residues4
Detailsbinding site for residue K C 101
ChainResidue
ALYS196
BHOH108
CDG5
CHOH207

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

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PDB entries from 2024-07-24

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