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6DOW

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 160 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH312
AHOH319
AHOH328
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues9
Detailsbinding site for residue RB A 203
ChainResidue
AASP192
AARG195
ALYS196
ARB204
AHOH328
AHOH355
bC5
bG6
bHOH102

site_idAC4
Number of Residues7
Detailsbinding site for residue RB A 204
ChainResidue
AGLU188
AASP192
ALYS196
ARB203
AHOH328
AHOH355
bC5

site_idAC5
Number of Residues3
Detailsbinding site for residue RB A 205
ChainResidue
ALYS121
AASN124
AHOH419

site_idAC6
Number of Residues2
Detailsbinding site for residue CL A 206
ChainResidue
ATYR83
AGOL211

site_idAC7
Number of Residues2
Detailsbinding site for residue CL A 207
ChainResidue
AHOH354
AHOH436

site_idAC8
Number of Residues2
Detailsbinding site for residue CL A 208
ChainResidue
AHOH410
AHOH444

site_idAC9
Number of Residues6
Detailsbinding site for residue GOL A 209
ChainResidue
AGLY76
AASN77
APRO78
AHOH322
CDG2
CDA3

site_idAD1
Number of Residues8
Detailsbinding site for residue GOL A 210
ChainResidue
AHIS115
ATYR119
AARG123
AGLU167
AASN170
AGOL211
AHOH306
AHOH373

site_idAD2
Number of Residues8
Detailsbinding site for residue GOL A 211
ChainResidue
AHIS115
AARG118
AASN170
ACL206
AGOL210
AHOH348
AHOH371
AHOH387

site_idAD3
Number of Residues3
Detailsbinding site for residue EDO A 212
ChainResidue
ALYS143
ATHR173
ATYR174

site_idAD4
Number of Residues4
Detailsbinding site for residue EDO A 213
ChainResidue
AGLU66
ASER125
ALYS127
AHOH331

site_idAD5
Number of Residues5
Detailsbinding site for residue RB B 101
ChainResidue
AASP132
AHOH309
BU4
BHOH208
bC5

site_idAD6
Number of Residues4
Detailsbinding site for residue RB C 101
ChainResidue
CDT4
CDG5
CEDO103
CHOH210

site_idAD7
Number of Residues4
Detailsbinding site for residue EDO C 102
ChainResidue
ATHR148
CDT4
CDG5
CHOH214

site_idAD8
Number of Residues8
Detailsbinding site for residue EDO C 103
ChainResidue
ALYS196
BA1
CDT6
CRB101
CHOH201
CHOH202
CHOH209
bG6

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP192
AASP71
AGLU109
AASP132

221051

PDB entries from 2024-06-12

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