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6DNC

E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AA0000027biological_processribosomal large subunit assembly
AA0000049molecular_functiontRNA binding
AA0001558biological_processregulation of cell growth
AA0002181biological_processcytoplasmic translation
AA0003735molecular_functionstructural constituent of ribosome
AA0005515molecular_functionprotein binding
AA0005737cellular_componentcytoplasm
AA0005840cellular_componentribosome
AA0006412biological_processtranslation
AA0019843molecular_functionrRNA binding
AA0022625cellular_componentcytosolic large ribosomal subunit
AA0042256biological_processcytosolic ribosome assembly
AA0043022molecular_functionribosome binding
AA0090070biological_processpositive regulation of ribosome biogenesis
AA1902626biological_processassembly of large subunit precursor of preribosome
AA1990904cellular_componentribonucleoprotein complex
AB0003735molecular_functionstructural constituent of ribosome
AB0005840cellular_componentribosome
AB0006412biological_processtranslation
BA0000027biological_processribosomal large subunit assembly
BA0002181biological_processcytoplasmic translation
BA0003735molecular_functionstructural constituent of ribosome
BA0005515molecular_functionprotein binding
BA0005737cellular_componentcytoplasm
BA0005829cellular_componentcytosol
BA0005840cellular_componentribosome
BA0006412biological_processtranslation
BA0019843molecular_functionrRNA binding
BA0022625cellular_componentcytosolic large ribosomal subunit
BA1990904cellular_componentribonucleoprotein complex
BB0000028biological_processribosomal small subunit assembly
BB0002181biological_processcytoplasmic translation
BB0003735molecular_functionstructural constituent of ribosome
BB0005737cellular_componentcytoplasm
BB0005829cellular_componentcytosol
BB0005840cellular_componentribosome
BB0006412biological_processtranslation
BB0006417biological_processregulation of translation
BB0019843molecular_functionrRNA binding
BB0022627cellular_componentcytosolic small ribosomal subunit
BB0043229cellular_componentintracellular organelle
BB0070181molecular_functionsmall ribosomal subunit rRNA binding
BB1990904cellular_componentribonucleoprotein complex
CA0000027biological_processribosomal large subunit assembly
CA0002181biological_processcytoplasmic translation
CA0003735molecular_functionstructural constituent of ribosome
CA0005737cellular_componentcytoplasm
CA0005840cellular_componentribosome
CA0006412biological_processtranslation
CA0019843molecular_functionrRNA binding
CA0022625cellular_componentcytosolic large ribosomal subunit
CA1990904cellular_componentribonucleoprotein complex
CB0000028biological_processribosomal small subunit assembly
CB0000400molecular_functionfour-way junction DNA binding
CB0002181biological_processcytoplasmic translation
CB0003735molecular_functionstructural constituent of ribosome
CB0004519molecular_functionendonuclease activity
CB0004520molecular_functionDNA endonuclease activity
CB0005737cellular_componentcytoplasm
CB0005840cellular_componentribosome
CB0006259biological_processDNA metabolic process
CB0006412biological_processtranslation
CB0015935cellular_componentsmall ribosomal subunit
CB0022627cellular_componentcytosolic small ribosomal subunit
CB0043229cellular_componentintracellular organelle
CB1990904cellular_componentribonucleoprotein complex
DA0000027biological_processribosomal large subunit assembly
DA0002181biological_processcytoplasmic translation
DA0003735molecular_functionstructural constituent of ribosome
DA0005737cellular_componentcytoplasm
DA0005840cellular_componentribosome
DA0006412biological_processtranslation
DA0015934cellular_componentlarge ribosomal subunit
DA0022625cellular_componentcytosolic large ribosomal subunit
DA1990904cellular_componentribonucleoprotein complex
DB0000028biological_processribosomal small subunit assembly
DB0002181biological_processcytoplasmic translation
DB0003735molecular_functionstructural constituent of ribosome
DB0005737cellular_componentcytoplasm
DB0005840cellular_componentribosome
DB0006412biological_processtranslation
DB0008270molecular_functionzinc ion binding
DB0019843molecular_functionrRNA binding
DB0022627cellular_componentcytosolic small ribosomal subunit
DB0046677biological_processresponse to antibiotic
DB0060090molecular_functionmolecular adaptor activity
DB0070181molecular_functionsmall ribosomal subunit rRNA binding
DB1990904cellular_componentribonucleoprotein complex
E0000027biological_processribosomal large subunit assembly
E0000049molecular_functiontRNA binding
E0002181biological_processcytoplasmic translation
E0003723molecular_functionRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0005515molecular_functionprotein binding
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0005840cellular_componentribosome
E0006412biological_processtranslation
E0006417biological_processregulation of translation
E0015934cellular_componentlarge ribosomal subunit
E0019843molecular_functionrRNA binding
E0022625cellular_componentcytosolic large ribosomal subunit
E0045947biological_processnegative regulation of translational initiation
E1990904cellular_componentribonucleoprotein complex
EA0002181biological_processcytoplasmic translation
EA0003735molecular_functionstructural constituent of ribosome
EA0005737cellular_componentcytoplasm
EA0005829cellular_componentcytosol
EA0005840cellular_componentribosome
EA0006412biological_processtranslation
EA0006413biological_processtranslational initiation
EA0008270molecular_functionzinc ion binding
EA0019843molecular_functionrRNA binding
EA0022625cellular_componentcytosolic large ribosomal subunit
EA0046872molecular_functionmetal ion binding
EA1904689biological_processnegative regulation of cytoplasmic translational initiation
EA1990904cellular_componentribonucleoprotein complex
EB0002181biological_processcytoplasmic translation
EB0003735molecular_functionstructural constituent of ribosome
EB0005515molecular_functionprotein binding
EB0005737cellular_componentcytoplasm
EB0005829cellular_componentcytosol
EB0005840cellular_componentribosome
EB0006412biological_processtranslation
EB0019843molecular_functionrRNA binding
EB0022627cellular_componentcytosolic small ribosomal subunit
EB0048027molecular_functionmRNA 5'-UTR binding
EB0070181molecular_functionsmall ribosomal subunit rRNA binding
EB1990904cellular_componentribonucleoprotein complex
F0000027biological_processribosomal large subunit assembly
F0002181biological_processcytoplasmic translation
F0003723molecular_functionRNA binding
F0003735molecular_functionstructural constituent of ribosome
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0008270molecular_functionzinc ion binding
F0015934cellular_componentlarge ribosomal subunit
F0016740molecular_functiontransferase activity
F0019843molecular_functionrRNA binding
F0022625cellular_componentcytosolic large ribosomal subunit
F0032297biological_processnegative regulation of DNA-templated DNA replication initiation
F1990082cellular_componentDnaA-L2 complex
F1990904cellular_componentribonucleoprotein complex
FA0000027biological_processribosomal large subunit assembly
FA0000302biological_processresponse to reactive oxygen species
FA0002181biological_processcytoplasmic translation
FA0003735molecular_functionstructural constituent of ribosome
FA0005515molecular_functionprotein binding
FA0005737cellular_componentcytoplasm
FA0005829cellular_componentcytosol
FA0005840cellular_componentribosome
FA0006412biological_processtranslation
FA0009314biological_processresponse to radiation
FA0015934cellular_componentlarge ribosomal subunit
FA0022625cellular_componentcytosolic large ribosomal subunit
FA1990904cellular_componentribonucleoprotein complex
FB0000028biological_processribosomal small subunit assembly
FB0000049molecular_functiontRNA binding
FB0002181biological_processcytoplasmic translation
FB0003723molecular_functionRNA binding
FB0003735molecular_functionstructural constituent of ribosome
FB0005737cellular_componentcytoplasm
FB0005829cellular_componentcytosol
FB0005840cellular_componentribosome
FB0006412biological_processtranslation
FB0015935cellular_componentsmall ribosomal subunit
FB0019843molecular_functionrRNA binding
FB0022627cellular_componentcytosolic small ribosomal subunit
FB0043229cellular_componentintracellular organelle
FB1990904cellular_componentribonucleoprotein complex
G0000027biological_processribosomal large subunit assembly
G0002181biological_processcytoplasmic translation
G0003735molecular_functionstructural constituent of ribosome
G0005515molecular_functionprotein binding
G0005737cellular_componentcytoplasm
G0005829cellular_componentcytosol
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0019843molecular_functionrRNA binding
G0022625cellular_componentcytosolic large ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
GA0000027biological_processribosomal large subunit assembly
GA0000049molecular_functiontRNA binding
GA0002181biological_processcytoplasmic translation
GA0003735molecular_functionstructural constituent of ribosome
GA0005737cellular_componentcytoplasm
GA0005829cellular_componentcytosol
GA0005840cellular_componentribosome
GA0006412biological_processtranslation
GA0022625cellular_componentcytosolic large ribosomal subunit
GA0043229cellular_componentintracellular organelle
GA0046677biological_processresponse to antibiotic
GA1990904cellular_componentribonucleoprotein complex
GB0000028biological_processribosomal small subunit assembly
GB0002181biological_processcytoplasmic translation
GB0003723molecular_functionRNA binding
GB0003735molecular_functionstructural constituent of ribosome
GB0005737cellular_componentcytoplasm
GB0005829cellular_componentcytosol
GB0005840cellular_componentribosome
GB0006412biological_processtranslation
GB0008073molecular_functionornithine decarboxylase inhibitor activity
GB0015935cellular_componentsmall ribosomal subunit
GB0019843molecular_functionrRNA binding
GB0022627cellular_componentcytosolic small ribosomal subunit
GB0070181molecular_functionsmall ribosomal subunit rRNA binding
GB1990904cellular_componentribonucleoprotein complex
H0001070molecular_functionRNA-binding transcription regulator activity
H0002181biological_processcytoplasmic translation
H0003677molecular_functionDNA binding
H0003735molecular_functionstructural constituent of ribosome
H0005515molecular_functionprotein binding
H0005737cellular_componentcytoplasm
H0005829cellular_componentcytosol
H0005840cellular_componentribosome
H0006353biological_processDNA-templated transcription termination
H0006412biological_processtranslation
H0006417biological_processregulation of translation
H0015934cellular_componentlarge ribosomal subunit
H0017148biological_processnegative regulation of translation
H0019843molecular_functionrRNA binding
H0022625cellular_componentcytosolic large ribosomal subunit
H0030371molecular_functiontranslation repressor activity
H0031555biological_processtranscriptional attenuation
H0042255biological_processribosome assembly
H0045892biological_processnegative regulation of DNA-templated transcription
H0046677biological_processresponse to antibiotic
H0048027molecular_functionmRNA 5'-UTR binding
H0060698molecular_functionendoribonuclease inhibitor activity
H1990904cellular_componentribonucleoprotein complex
H2000766biological_processnegative regulation of cytoplasmic translation
HA0002181biological_processcytoplasmic translation
HA0003735molecular_functionstructural constituent of ribosome
HA0005515molecular_functionprotein binding
HA0005737cellular_componentcytoplasm
HA0005840cellular_componentribosome
HA0006412biological_processtranslation
HA0022625cellular_componentcytosolic large ribosomal subunit
HA1990904cellular_componentribonucleoprotein complex
HB0000028biological_processribosomal small subunit assembly
HB0002181biological_processcytoplasmic translation
HB0003735molecular_functionstructural constituent of ribosome
HB0005737cellular_componentcytoplasm
HB0005829cellular_componentcytosol
HB0005840cellular_componentribosome
HB0006412biological_processtranslation
HB0019843molecular_functionrRNA binding
HB0022627cellular_componentcytosolic small ribosomal subunit
HB1990904cellular_componentribonucleoprotein complex
I0000027biological_processribosomal large subunit assembly
I0000049molecular_functiontRNA binding
I0002181biological_processcytoplasmic translation
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0008097molecular_function5S rRNA binding
I0019843molecular_functionrRNA binding
I0022625cellular_componentcytosolic large ribosomal subunit
I1990904cellular_componentribonucleoprotein complex
IA0002181biological_processcytoplasmic translation
IA0003735molecular_functionstructural constituent of ribosome
IA0005737cellular_componentcytoplasm
IA0005840cellular_componentribosome
IA0006412biological_processtranslation
IA0022625cellular_componentcytosolic large ribosomal subunit
IA1990904cellular_componentribonucleoprotein complex
J0000027biological_processribosomal large subunit assembly
J0002181biological_processcytoplasmic translation
J0003735molecular_functionstructural constituent of ribosome
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0019843molecular_functionrRNA binding
J0022625cellular_componentcytosolic large ribosomal subunit
J0046677biological_processresponse to antibiotic
J0070180molecular_functionlarge ribosomal subunit rRNA binding
J1990904cellular_componentribonucleoprotein complex
JA0002181biological_processcytoplasmic translation
JA0003735molecular_functionstructural constituent of ribosome
JA0005737cellular_componentcytoplasm
JA0005840cellular_componentribosome
JA0006412biological_processtranslation
JA0022625cellular_componentcytosolic large ribosomal subunit
JA0043229cellular_componentintracellular organelle
JA1990904cellular_componentribonucleoprotein complex
K0002181biological_processcytoplasmic translation
K0003735molecular_functionstructural constituent of ribosome
K0005515molecular_functionprotein binding
K0005737cellular_componentcytoplasm
K0005829cellular_componentcytosol
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0019843molecular_functionrRNA binding
K0022625cellular_componentcytosolic large ribosomal subunit
K0070180molecular_functionlarge ribosomal subunit rRNA binding
K1990904cellular_componentribonucleoprotein complex
L0002181biological_processcytoplasmic translation
L0003735molecular_functionstructural constituent of ribosome
L0003924molecular_functionGTPase activity
L0005515molecular_functionprotein binding
L0005737cellular_componentcytoplasm
L0005829cellular_componentcytosol
L0005840cellular_componentribosome
L0006412biological_processtranslation
L0006417biological_processregulation of translation
L0015934cellular_componentlarge ribosomal subunit
L0017148biological_processnegative regulation of translation
L0019843molecular_functionrRNA binding
L0022625cellular_componentcytosolic large ribosomal subunit
L0043022molecular_functionribosome binding
L0070180molecular_functionlarge ribosomal subunit rRNA binding
L1990904cellular_componentribonucleoprotein complex
M0000027biological_processribosomal large subunit assembly
M0002181biological_processcytoplasmic translation
M0003735molecular_functionstructural constituent of ribosome
M0005515molecular_functionprotein binding
M0005737cellular_componentcytoplasm
M0005829cellular_componentcytosol
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0006415biological_processtranslational termination
M0015968biological_processstringent response
M0019843molecular_functionrRNA binding
M0022625cellular_componentcytosolic large ribosomal subunit
M0070180molecular_functionlarge ribosomal subunit rRNA binding
M1990904cellular_componentribonucleoprotein complex
MA0003747molecular_functiontranslation release factor activity
MA0005515molecular_functionprotein binding
MA0005737cellular_componentcytoplasm
MA0005829cellular_componentcytosol
MA0006412biological_processtranslation
MA0006415biological_processtranslational termination
MA0016149molecular_functiontranslation release factor activity, codon specific
MA0043022molecular_functionribosome binding
N0002181biological_processcytoplasmic translation
N0003729molecular_functionmRNA binding
N0003735molecular_functionstructural constituent of ribosome
N0005737cellular_componentcytoplasm
N0005829cellular_componentcytosol
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0008270molecular_functionzinc ion binding
N0017148biological_processnegative regulation of translation
N0022625cellular_componentcytosolic large ribosomal subunit
N0043229cellular_componentintracellular organelle
N0048027molecular_functionmRNA 5'-UTR binding
N0070180molecular_functionlarge ribosomal subunit rRNA binding
N1990904cellular_componentribonucleoprotein complex
O0002181biological_processcytoplasmic translation
O0003735molecular_functionstructural constituent of ribosome
O0005515molecular_functionprotein binding
O0005737cellular_componentcytoplasm
O0005829cellular_componentcytosol
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0015934cellular_componentlarge ribosomal subunit
O0019843molecular_functionrRNA binding
O0022625cellular_componentcytosolic large ribosomal subunit
O0070180molecular_functionlarge ribosomal subunit rRNA binding
O1990904cellular_componentribonucleoprotein complex
OA0000028biological_processribosomal small subunit assembly
OA0002181biological_processcytoplasmic translation
OA0003735molecular_functionstructural constituent of ribosome
OA0005515molecular_functionprotein binding
OA0005737cellular_componentcytoplasm
OA0005840cellular_componentribosome
OA0006412biological_processtranslation
OA0008270molecular_functionzinc ion binding
OA0015935cellular_componentsmall ribosomal subunit
OA0022627cellular_componentcytosolic small ribosomal subunit
OA1990904cellular_componentribonucleoprotein complex
P0002181biological_processcytoplasmic translation
P0003735molecular_functionstructural constituent of ribosome
P0005515molecular_functionprotein binding
P0005737cellular_componentcytoplasm
P0005840cellular_componentribosome
P0006412biological_processtranslation
P0015934cellular_componentlarge ribosomal subunit
P0019843molecular_functionrRNA binding
P0022625cellular_componentcytosolic large ribosomal subunit
P1990904cellular_componentribonucleoprotein complex
PA0000028biological_processribosomal small subunit assembly
PA0002181biological_processcytoplasmic translation
PA0003676molecular_functionnucleic acid binding
PA0003723molecular_functionRNA binding
PA0003729molecular_functionmRNA binding
PA0003735molecular_functionstructural constituent of ribosome
PA0005737cellular_componentcytoplasm
PA0005829cellular_componentcytosol
PA0005840cellular_componentribosome
PA0006412biological_processtranslation
PA0019843molecular_functionrRNA binding
PA0022627cellular_componentcytosolic small ribosomal subunit
PA1990904cellular_componentribonucleoprotein complex
Q0000027biological_processribosomal large subunit assembly
Q0000049molecular_functiontRNA binding
Q0002181biological_processcytoplasmic translation
Q0003735molecular_functionstructural constituent of ribosome
Q0005737cellular_componentcytoplasm
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0019843molecular_functionrRNA binding
Q0022625cellular_componentcytosolic large ribosomal subunit
Q1990904cellular_componentribonucleoprotein complex
QA0000028biological_processribosomal small subunit assembly
QA0000900molecular_functionmRNA regulatory element binding translation repressor activity
QA0002181biological_processcytoplasmic translation
QA0003723molecular_functionRNA binding
QA0003735molecular_functionstructural constituent of ribosome
QA0005515molecular_functionprotein binding
QA0005737cellular_componentcytoplasm
QA0005829cellular_componentcytosol
QA0005840cellular_componentribosome
QA0006353biological_processDNA-templated transcription termination
QA0006412biological_processtranslation
QA0006417biological_processregulation of translation
QA0015935cellular_componentsmall ribosomal subunit
QA0019843molecular_functionrRNA binding
QA0022627cellular_componentcytosolic small ribosomal subunit
QA0031564biological_processtranscription antitermination
QA0042254biological_processribosome biogenesis
QA0042274biological_processribosomal small subunit biogenesis
QA0045947biological_processnegative regulation of translational initiation
QA0046677biological_processresponse to antibiotic
QA0048027molecular_functionmRNA 5'-UTR binding
QA1990145biological_processmaintenance of translational fidelity
QA1990904cellular_componentribonucleoprotein complex
R0000027biological_processribosomal large subunit assembly
R0002181biological_processcytoplasmic translation
R0003735molecular_functionstructural constituent of ribosome
R0005515molecular_functionprotein binding
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0022625cellular_componentcytosolic large ribosomal subunit
R1990904cellular_componentribonucleoprotein complex
RA0000028biological_processribosomal small subunit assembly
RA0002181biological_processcytoplasmic translation
RA0003723molecular_functionRNA binding
RA0003735molecular_functionstructural constituent of ribosome
RA0005515molecular_functionprotein binding
RA0005737cellular_componentcytoplasm
RA0005829cellular_componentcytosol
RA0005840cellular_componentribosome
RA0006412biological_processtranslation
RA0015935cellular_componentsmall ribosomal subunit
RA0019843molecular_functionrRNA binding
RA0022627cellular_componentcytosolic small ribosomal subunit
RA0043229cellular_componentintracellular organelle
RA0046677biological_processresponse to antibiotic
RA1990145biological_processmaintenance of translational fidelity
RA1990904cellular_componentribonucleoprotein complex
S0002181biological_processcytoplasmic translation
S0003735molecular_functionstructural constituent of ribosome
S0005737cellular_componentcytoplasm
S0005829cellular_componentcytosol
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0008097molecular_function5S rRNA binding
S0019843molecular_functionrRNA binding
S0022625cellular_componentcytosolic large ribosomal subunit
S0043229cellular_componentintracellular organelle
S1990904cellular_componentribonucleoprotein complex
SA0002181biological_processcytoplasmic translation
SA0003735molecular_functionstructural constituent of ribosome
SA0005515molecular_functionprotein binding
SA0005737cellular_componentcytoplasm
SA0005829cellular_componentcytosol
SA0005840cellular_componentribosome
SA0006412biological_processtranslation
SA0019843molecular_functionrRNA binding
SA0022627cellular_componentcytosolic small ribosomal subunit
SA0043229cellular_componentintracellular organelle
SA0048027molecular_functionmRNA 5'-UTR binding
SA0070181molecular_functionsmall ribosomal subunit rRNA binding
SA1990904cellular_componentribonucleoprotein complex
T0000027biological_processribosomal large subunit assembly
T0002181biological_processcytoplasmic translation
T0003735molecular_functionstructural constituent of ribosome
T0005737cellular_componentcytoplasm
T0005829cellular_componentcytosol
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0019843molecular_functionrRNA binding
T0022625cellular_componentcytosolic large ribosomal subunit
T0070180molecular_functionlarge ribosomal subunit rRNA binding
T1990904cellular_componentribonucleoprotein complex
TA0003723molecular_functionRNA binding
TA0003735molecular_functionstructural constituent of ribosome
TA0006412biological_processtranslation
TA0015935cellular_componentsmall ribosomal subunit
U0000027biological_processribosomal large subunit assembly
U0000900molecular_functionmRNA regulatory element binding translation repressor activity
U0002181biological_processcytoplasmic translation
U0003729molecular_functionmRNA binding
U0003735molecular_functionstructural constituent of ribosome
U0005737cellular_componentcytoplasm
U0005829cellular_componentcytosol
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0017148biological_processnegative regulation of translation
U0019843molecular_functionrRNA binding
U0022625cellular_componentcytosolic large ribosomal subunit
U0070180molecular_functionlarge ribosomal subunit rRNA binding
U1990904cellular_componentribonucleoprotein complex
UA0000028biological_processribosomal small subunit assembly
UA0002181biological_processcytoplasmic translation
UA0003735molecular_functionstructural constituent of ribosome
UA0005737cellular_componentcytoplasm
UA0005829cellular_componentcytosol
UA0005840cellular_componentribosome
UA0006412biological_processtranslation
UA0006417biological_processregulation of translation
UA0019843molecular_functionrRNA binding
UA0022627cellular_componentcytosolic small ribosomal subunit
UA0043229cellular_componentintracellular organelle
UA0043488biological_processregulation of mRNA stability
UA1990904cellular_componentribonucleoprotein complex
V0002181biological_processcytoplasmic translation
V0003723molecular_functionRNA binding
V0003735molecular_functionstructural constituent of ribosome
V0005737cellular_componentcytoplasm
V0005829cellular_componentcytosol
V0005840cellular_componentribosome
V0006412biological_processtranslation
V0019843molecular_functionrRNA binding
V0022625cellular_componentcytosolic large ribosomal subunit
V0043229cellular_componentintracellular organelle
V1990904cellular_componentribonucleoprotein complex
VA0000049molecular_functiontRNA binding
VA0002181biological_processcytoplasmic translation
VA0003723molecular_functionRNA binding
VA0003735molecular_functionstructural constituent of ribosome
VA0005737cellular_componentcytoplasm
VA0005829cellular_componentcytosol
VA0005840cellular_componentribosome
VA0006412biological_processtranslation
VA0022627cellular_componentcytosolic small ribosomal subunit
VA0043229cellular_componentintracellular organelle
VA1990904cellular_componentribonucleoprotein complex
W0002181biological_processcytoplasmic translation
W0003735molecular_functionstructural constituent of ribosome
W0005515molecular_functionprotein binding
W0005737cellular_componentcytoplasm
W0005829cellular_componentcytosol
W0005840cellular_componentribosome
W0006412biological_processtranslation
W0015934cellular_componentlarge ribosomal subunit
W0019843molecular_functionrRNA binding
W0022625cellular_componentcytosolic large ribosomal subunit
W0042255biological_processribosome assembly
W0042256biological_processcytosolic ribosome assembly
W0046677biological_processresponse to antibiotic
W0070180molecular_functionlarge ribosomal subunit rRNA binding
W1902626biological_processassembly of large subunit precursor of preribosome
W1990904cellular_componentribonucleoprotein complex
WA0000049molecular_functiontRNA binding
WA0001072molecular_functiontranscription antitermination factor activity, RNA binding
WA0002181biological_processcytoplasmic translation
WA0003723molecular_functionRNA binding
WA0003735molecular_functionstructural constituent of ribosome
WA0005515molecular_functionprotein binding
WA0005737cellular_componentcytoplasm
WA0005829cellular_componentcytosol
WA0005840cellular_componentribosome
WA0006412biological_processtranslation
WA0008023cellular_componenttranscription elongation factor complex
WA0015935cellular_componentsmall ribosomal subunit
WA0022627cellular_componentcytosolic small ribosomal subunit
WA0031564biological_processtranscription antitermination
WA0032784biological_processregulation of DNA-templated transcription elongation
WA0042254biological_processribosome biogenesis
WA1990904cellular_componentribonucleoprotein complex
X0000027biological_processribosomal large subunit assembly
X0002181biological_processcytoplasmic translation
X0003735molecular_functionstructural constituent of ribosome
X0005515molecular_functionprotein binding
X0005737cellular_componentcytoplasm
X0005840cellular_componentribosome
X0006412biological_processtranslation
X0019843molecular_functionrRNA binding
X0022625cellular_componentcytosolic large ribosomal subunit
X1990904cellular_componentribonucleoprotein complex
XA0002181biological_processcytoplasmic translation
XA0003735molecular_functionstructural constituent of ribosome
XA0005515molecular_functionprotein binding
XA0005737cellular_componentcytoplasm
XA0005829cellular_componentcytosol
XA0005840cellular_componentribosome
XA0006412biological_processtranslation
XA0019843molecular_functionrRNA binding
XA0022627cellular_componentcytosolic small ribosomal subunit
XA0070181molecular_functionsmall ribosomal subunit rRNA binding
XA1990904cellular_componentribonucleoprotein complex
Y0000027biological_processribosomal large subunit assembly
Y0002181biological_processcytoplasmic translation
Y0003723molecular_functionRNA binding
Y0003735molecular_functionstructural constituent of ribosome
Y0005515molecular_functionprotein binding
Y0005737cellular_componentcytoplasm
Y0005829cellular_componentcytosol
Y0005840cellular_componentribosome
Y0006412biological_processtranslation
Y0019843molecular_functionrRNA binding
Y0022625cellular_componentcytosolic large ribosomal subunit
Y0070180molecular_functionlarge ribosomal subunit rRNA binding
Y1990904cellular_componentribonucleoprotein complex
YA0000049molecular_functiontRNA binding
YA0000372biological_processGroup I intron splicing
YA0002181biological_processcytoplasmic translation
YA0003735molecular_functionstructural constituent of ribosome
YA0005515molecular_functionprotein binding
YA0005737cellular_componentcytoplasm
YA0005829cellular_componentcytosol
YA0005840cellular_componentribosome
YA0006412biological_processtranslation
YA0015935cellular_componentsmall ribosomal subunit
YA0019843molecular_functionrRNA binding
YA0022627cellular_componentcytosolic small ribosomal subunit
YA0033120biological_processpositive regulation of RNA splicing
YA0034336molecular_functionmisfolded RNA binding
YA0034337biological_processRNA folding
YA0046677biological_processresponse to antibiotic
YA1990145biological_processmaintenance of translational fidelity
YA1990904cellular_componentribonucleoprotein complex
Z0000027biological_processribosomal large subunit assembly
Z0002181biological_processcytoplasmic translation
Z0003723molecular_functionRNA binding
Z0003735molecular_functionstructural constituent of ribosome
Z0005737cellular_componentcytoplasm
Z0005829cellular_componentcytosol
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0008097molecular_function5S rRNA binding
Z0009314biological_processresponse to radiation
Z0017148biological_processnegative regulation of translation
Z0019843molecular_functionrRNA binding
Z0022625cellular_componentcytosolic large ribosomal subunit
Z1990904cellular_componentribonucleoprotein complex
ZA0000049molecular_functiontRNA binding
ZA0002181biological_processcytoplasmic translation
ZA0003676molecular_functionnucleic acid binding
ZA0003723molecular_functionRNA binding
ZA0003735molecular_functionstructural constituent of ribosome
ZA0005515molecular_functionprotein binding
ZA0005737cellular_componentcytoplasm
ZA0005829cellular_componentcytosol
ZA0005840cellular_componentribosome
ZA0006412biological_processtranslation
ZA0015935cellular_componentsmall ribosomal subunit
ZA0019843molecular_functionrRNA binding
ZA0022627cellular_componentcytosolic small ribosomal subunit
ZA1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkgvrrp.DGsvirFdgNacVL
ChainResidueDetails
OALA60-LEU86

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV
ChainResidueDetails
XLYS81-VAL96

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SeLlakFVnilmvdGKKstaesIVysA
ChainResidueDetails
TASER19-ALA45

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaVVSTSkGVMtdraAR
ChainResidueDetails
UAGLY99-ARG116

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALnaA.GFrItnitDvTPiPHN
ChainResidueDetails
XAILE96-ASN118

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
YALYS42-ARG49

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIrEcRPLS
ChainResidueDetails
DBGLY55-SER67

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IatLknYITEs.GKIvpsRI
ChainResidueDetails
EBILE20-ILE43

site_idPS00061
Number of Residues29
DetailsADH_SHORT Short-chain dehydrogenases/reductases family signature. PdhkhavialTsiYGVGKTRSkAILaAAG
ChainResidueDetails
ZAPRO9-GLY37

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGRqhvpvfVtdemVGhkLGEFapT
ChainResidueDetails
FBASN52-THR76

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LaaISGQkpLiTkARkS
ChainResidueDetails
ILEU56-SER72

site_idPS00359
Number of Residues16
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. RsIeGTarSMGlVVeD
ChainResidueDetails
MARG126-ASP141

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGisGQagAirhGiTRAL
ChainResidueDetails
VAGLY68-LEU86

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvrGPIpLPT
ChainResidueDetails
WAALA29-THR44

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFaehKkDhhSrrgLlrMvsqrrkLldY
ChainResidueDetails
BBLEU38-TYR68

site_idPS00430
Number of Residues66
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
ChainResidueDetails
XMET1-LYS66

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV
ChainResidueDetails
WLYS83-VAL107

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD
ChainResidueDetails
FPRO217-ASP228

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR
ChainResidueDetails
GPHE101-ARG124

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG
ChainResidueDetails
PLYS109-GLY139

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGV
ChainResidueDetails
JPRO153-VAL161

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CrqtgrphgflrkFGLSRiKVR
ChainResidueDetails
ABARG63-ARG85

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyntseahTtyGviG
ChainResidueDetails
PAALA162-GLY196

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
ChainResidueDetails
CAGLN39-VAL53

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YtTtKNkrtkPekLElkKFD
ChainResidueDetails
GATYR20-ASP39

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGygkar.EVpa.AI
ChainResidueDetails
RAGLY27-ILE59

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP
ChainResidueDetails
QLYS58-PRO69

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEgRLdnvVYRmgfGaTraeARqLV
ChainResidueDetails
QALEU93-VAL117

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. TLlgLgLrRigHtVeredtpairgMInaVsfMV
ChainResidueDetails
DATHR22-VAL54

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
ChainResidueDetails
ZAARG86-GLN99

site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GslGdqvnVkaGYarNFLvpqgkAvpaT
ChainResidueDetails
KGLY13-THR40

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGnveyW
ChainResidueDetails
QARG81-TRP92

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VtIRLARHGA
ChainResidueDetails
CBVAL2-ALA11

site_idPS00745
Number of Residues17
DetailsRF_PROK_I Prokaryotic-type class I peptide chain release factors signature. RSsGaGGQHVNttdSAI
ChainResidueDetails
MAARG228-ILE244

site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRamfrkLkVYaG
ChainResidueDetails
NVAL105-GLY127

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpsvlkRnrsh.GFraR
ChainResidueDetails
HALYS2-ARG21

site_idPS00828
Number of Residues27
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CrnCkiVkRdgvIrViCsaepKHkQrQ
ChainResidueDetails
JACYS11-GLN37

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG
ChainResidueDetails
AAGLY30-GLY44

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTVrGAaKRFkktgkggfkhkhanl.RH
ChainResidueDetails
IALYS4-HIS30

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrqfRqLWIARINaaaR
ChainResidueDetails
ULYS53-ARG69

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
ChainResidueDetails
OAMET5-GLY16

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
ChainResidueDetails
OAPRO157-PRO181

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGAVR.KAKLYYLR
ChainResidueDetails
TVAL85-ARG100

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN
ChainResidueDetails
SAGLY43-ASN52

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
ChainResidueDetails
YASP7-VAL24

site_idPS01109
Number of Residues35
DetailsRIBOSOMAL_L10 Ribosomal protein L10 signature. KqaIvaeVSevakgalsaVvaDsrGVTVdKMteLR
ChainResidueDetails
LLYS8-ARG42

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. DVcskcHPFFTgkqrdvatg....GR
ChainResidueDetails
EAASP35-ARG56

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTlpKaKelrrvvEpLITlAK
ChainResidueDetails
RILE34-LYS56

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT
ChainResidueDetails
VVAL72-THR94

site_idPS01181
Number of Residues13
DetailsRIBOSOMAL_S21 Ribosomal protein S21 signature. DvALRRFKRsceK
ChainResidueDetails
HBASP12-LYS24

site_idPS01199
Number of Residues19
DetailsRIBOSOMAL_L1 Ribosomal protein L1 signature. MrvVgq.LGqvLGPRGlMPN
ChainResidueDetails
EMET121-ASN139

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0000269|PubMed:776663
ChainResidueDetails
EBALA1
LLYS105
ELYS186
ELYS197

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
YALYS107
EACYS37
EACYS40

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
EALYS8
MLYS80

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PDB entries from 2024-07-24

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